CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0000141701
(
Schistosoma rodhaini
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SROB_0000141701
T156897_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0000141701-mRNA-1
C2H2 ZF
746
768
DTCEYCGKIFKNCSNLTVHRRSH
SROB_0000141701-mRNA-1
C2H2 ZF
774
796
YQCKLCNYACAQSSKLTRHMKTH
SROB_0000141701-mRNA-1
C2H2 ZF
804
828
YLCKYCHTPFIVPSTLEKHMRKCMH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma rodhaini
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0012s03120
Populus trichocarpa
POPTR_0012s03120
N
POPTR_0012s03130
Populus trichocarpa
POPTR_0012s03130
N
POPTR_0015s00940
Populus trichocarpa
POPTR_0015s00940
N
SapurV1A.0755s0140
Salix purpurea
SapurV1A.0755s0140
N