CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0000403501
(
Schistosoma rodhaini
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SROB_0000403501
T156913_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0000403501-mRNA-1
C2H2 ZF
232
256
YKCTYPNCTKAYYKRSHLNEHYHLH
SROB_0000403501-mRNA-1
C2H2 ZF
262
286
HLCNQPGCNARFTRADQLSRHRRAH
SROB_0000403501-mRNA-1
C2H2 ZF
292
313
FHCNVCLKRFKRSDHLKVHLTR
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma rodhaini
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_04079
Schistosoma haematobium
A_04079
N
D915_03879
Fasciola hepatica
D915_03879
N
ECPE_0001429701
Echinostoma caproni
ECPE_0001429701
N
SCUD_0002298501
Schistosoma curassoni
SCUD_0002298501
N
SMRZ_0000398701
Schistosoma margrebowiei
SMRZ_0000398701
N
T265_00279
Opisthorchis viverrini
T265_00279
N