CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0001680401
(
Schistosoma rodhaini
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SROB_0001680401
T156964_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0001680401-mRNA-1
C2H2 ZF
250
271
LRCDQCGKYYRNDYSLHHHICL
SROB_0001680401-mRNA-1
C2H2 ZF
293
315
YFCPSCRKPFKWLGNLTRHFYVH
SROB_0001680401-mRNA-1
C2H2 ZF
321
343
FRCDICSKEFFSAYQVKRHMNSH
SROB_0001680401-mRNA-1
C2H2 ZF
348
370
FKCEVCDKPFTCKYACAWHTRQH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma rodhaini
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CG12219
Drosophila melanogaster
FBgn0043796
D
GF21360
Drosophila ananassae
FBgn0098362
I
GG17678
Drosophila erecta
FBgn0109900
I
GI15525
Drosophila mojavensis
FBgn0138274
I
GL14180
Drosophila persimilis
FBgn0151785
I
GM12578
Drosophila sechellia
FBgn0167515
I
GK10245
Drosophila willistoni
FBgn0212260
I
GA22386
Drosophila pseudoobscura
FBgn0243793
I