CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SSLN_0000541701
(
Schistocephalus solidus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SSLN_0000541701
T157076_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SSLN_0000541701-mRNA-1
C2H2 ZF
223
244
LRCEECGKYYRNEYSLHHHICL
SSLN_0000541701-mRNA-1
C2H2 ZF
266
288
YFCPACNKPFKWLGNLTRHYYVH
SSLN_0000541701-mRNA-1
C2H2 ZF
294
316
FKCDICQKEFFSAYQVKRHMNSH
SSLN_0000541701-mRNA-1
C2H2 ZF
321
343
FNCEVCDKPFTCKYACAWHMRQH
Links
Other
C2H2 ZF
family TFs
Other
Schistocephalus solidus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA035328
Oryza indica
BGIOSGA035328
N
OBART11G14710
Oryza barthii
OBART11G14710
N
OGLUM11G14240
Oryza glumaepatula
OGLUM11G14240
N
OMERI11G12060
Oryza meridionalis
OMERI11G12060
N
ONIVA11G14130
Oryza nivara
ONIVA11G14130
N
ORGLA11G0125700
Oryza glaberrima
ORGLA11G0125700
N
ORUFI11G15720
Oryza rufipogon
ORUFI11G15720
N