SSTP_0000165900 (Strongyloides stercoralis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SSTP_0000165900 T157327_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens
M03666_2.00 		Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA		 SELEX
Nitta et al.(2015)
sens_1 		0.790 0.848
sens
M06056_2.00 		Drosophila melanogaster
AAATCACDGC
GCHGTGATTT		 B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573 		0.790 0.848
sens
M06057_2.00 		Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN		 B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573 		0.790 0.848
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SSTP_0000165900.1 C2H2 ZF 216 238
SSTP_0000165900.1 C2H2 ZF 244 266
SSTP_0000165900.1 C2H2 ZF 272 294
SSTP_0000165900.1 C2H2 ZF 300 323

Links

Other C2H2 ZF family TFs
Other Strongyloides stercoralis TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_6BS_938E60C80 Triticum aestivum Traes_6BS_938E60C80 N
Traes_7DS_6B1F6F5E5 Triticum aestivum Traes_7DS_6B1F6F5E5 N