CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVE_1739800
(
Strongyloides venezuelensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SVE_1739800
T157435_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_1739800.1
C2H2 ZF
258
279
YQCERCGKMFTYSYYRDKHLKY
SVE_1739800.1
C2H2 ZF
290
313
FPCPLCTRSFEKRDRLRIHILHVH
SVE_1739800.1
C2H2 ZF
319
341
HICNICGKSFSQSSSLNKHLRVH
SVE_1739800.1
C2H2 ZF
347
369
YKCPYCTKSFTASSILRTHIRQH
SVE_1739800.1
C2H2 ZF
375
398
FKCTFCGKCFASHAAIGSHQARSH
SVE_1739800.1
C2H2 ZF
407
430
HKCTKCNKCFDNISHLNYHLQCTH
Links
Other
C2H2 ZF
family TFs
Other
Strongyloides venezuelensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PTRK_0000802500
Parastrongyloides trichosuri
PTRK_0000802500
N
0.769
RSKR_0000934700
Rhabditophanes kr3021
RSKR_0000934700
N
0.757
SPAL_0000222400
Strongyloides papillosus
SPAL_0000222400
N
0.819
SSTP_0000128900
Strongyloides stercoralis
SSTP_0000128900
N
0.813