TCLT_0000472801 (Thelazia callipaeda)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 TCLT_0000472801 T157719_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Blimp-1
M03692_2.00 		Drosophila melanogaster
NNYACTTTCVYYN
NRRBGAAAGTRNN		 SELEX
Nitta et al.(2015)
Blimp-1_1 		0.779 0.851
Blimp-1
M06141_2.00 		Drosophila melanogaster
ACTTTCACTTTY
RAAAGTGAAAGT		 B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625 		0.779 0.851
Blimp-1
M06142_2.00 		Drosophila melanogaster
RCTTTCMCTTTY
RAAAGKGAAAGY		 B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625 		0.779 0.851
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TCLT_0000472801-mRNA-1 C2H2 ZF 623 645
TCLT_0000472801-mRNA-1 C2H2 ZF 651 673
TCLT_0000472801-mRNA-1 C2H2 ZF 679 701
TCLT_0000472801-mRNA-1 C2H2 ZF 707 729
TCLT_0000472801-mRNA-1 C2H2 ZF 735 756

Links

Other C2H2 ZF family TFs
Other Thelazia callipaeda TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU08634 Neurospora crassa NCU08634 D
SAPIO_CDS1284 Scedosporium apiospermum SAPIO_CDS1284 I
fgenesh1_pg.C_scaffold_4000918 Cryphonectria parasitica fgenesh1_pg.C_scaffold_4000918 I
estExt_fgenesh3_pm.C_40010 Neurospora discreta estExt_fgenesh3_pm.C_40010 I
X797_002511 Metarhizium robertsii X797_002511 I
VHEMI05092 Torrubiella hemipterigena VHEMI05092 I
VDBG_09975 Verticillium alfalfae VDBG_09975 I
VDAG_06269 Verticillium dahliae VDAG_06269 I
UV8b_5959 Ustilaginoidea virens UV8b_5959 I
THITE_2120613 Thielavia terrestris THITE_2120613 I
SMAC_09090 Sordaria macrospora SMAC_09090 I
VDBG_09975 Verticillium albo atrum VDBG_09975 I
PODANS_1_230 Podospora anserina PODANS_1_230 I
PFICI_03083 Pestalotiopsis fici PFICI_03083 I
NEUTE1DRAFT_127029 Neurospora tetrasperma NEUTE1DRAFT_127029 I
MYCTH_2307931 Myceliophthora thermophila MYCTH_2307931 I
MGU_09664 Metarhizium guizhouense MGU_09664 I
MBR_00157 Metarhizium brunneum MBR_00157 I
MANI_000381 Metarhizium anisopliae MANI_000381 I
MAJ_05920 Metarhizium majus MAJ_05920 I
MAC_05493 Metarhizium acridum MAC_05493 I
CHGG_02048 Chaetomium globosum CHGG_02048 I