TCNE_0000669301 (Toxocara canis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 TCNE_0000669301 T157774_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.770 0.796
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.770 0.796
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.770 0.796
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.770 0.796
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.764 0.770
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.764 0.770
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.764 0.770
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.763 0.779
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.763 0.779
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.763 0.779
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.763 0.779
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TCNE_0000669301-mRNA-1 C2H2 ZF 19 41
TCNE_0000669301-mRNA-1 C2H2 ZF 50 72
TCNE_0000669301-mRNA-1 C2H2 ZF 76 98
TCNE_0000669301-mRNA-1 C2H2 ZF 104 126
TCNE_0000669301-mRNA-1 C2H2 ZF 132 152

Links

Other C2H2 ZF family TFs
Other Toxocara canis TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSXMAG00000005499 Xiphophorus maculatus ENSXMAG00000005499 N
fbxo41 Oryzias latipes ENSORLG00000006366 N
ENSPFOG00000011684 Poecilia formosa ENSPFOG00000011684 N
ENSPPYG00000012296 Pongo abelii ENSPPYG00000012296 N
ENSPSIG00000002615 Pelodiscus sinensis ENSPSIG00000002615 N
Fbxo41 Rattus norvegicus ENSRNOG00000033202 N
FBXO41 Sorex araneus ENSSARG00000011507 N
FBXO41 Taeniopygia guttata ENSTGUG00000015356 N
fbxo41 Tetraodon nigroviridis ENSTNIG00000018046 N
fbxo41 Takifugu rubripes ENSTRUG00000001696 N
ENSONIG00000017557 Oreochromis niloticus ENSONIG00000017557 N
Aan_R014934 Calypte anna Aan_R014934 N
Afo_R006068 Aptenodytes forsteri Afo_R006068 N
Alligator_sinensis_CCG003358.1 Alligator sinensis Alligator_sinensis_CCG003358.1 N
Cmyd_10014647 Chelonia mydas Cmyd_10014647 N
Ogr04473 Ophisaurus gracilis Ogr04473 N
Ogr08674 Ophisaurus gracilis Ogr08674 N
Pvit_16847 Pogona vitticeps Pvit_16847 N
fbxo41 Xenopus tropicalis XB-GENE-966908 N
ENSLACG00000014652 Latimeria chalumnae ENSLACG00000014652 N
ENSAMXG00000004878 Astyanax mexicanus ENSAMXG00000004878 N
fbxo41 Danio rerio ENSDARG00000078908 N
ENSEEUG00000012976 Erinaceus europaeus ENSEEUG00000012976 N
ENSFALG00000012636 Ficedula albicollis ENSFALG00000012636 N
FBXO41 Felis catus ENSFCAG00000009398 N
ZNF365 Homo sapiens ENSG00000138311 N
fbxo41 Gasterosteus aculeatus ENSGACG00000017614 N
ENSGALG00000016087 Gallus gallus ENSGALG00000016087 N
ENSGMOG00000017980 Gadus morhua ENSGMOG00000017980 N
FBXO41 Anolis carolinensis ENSACAG00000000364 N
ENSLOCG00000002435 Lepisosteus oculatus ENSLOCG00000002435 N
ENSLOCG00000006834 Lepisosteus oculatus ENSLOCG00000006834 N
FBXO41 Meleagris gallopavo ENSMGAG00000013309 N
FBXO41 Monodelphis domestica ENSMODG00000016969 N
ENSMPUG00000007635 Mustela putorius furo ENSMPUG00000007635 N
Fbxo41 Mus musculus ENSMUSG00000047013 N
ENSOARG00000011843 Ovis aries ENSOARG00000011843 N
FBXO41 Oryctolagus cuniculus ENSOCUG00000002433 N