TMUE_s0065001300 (Trichuris muris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 TMUE_s0065001300 T157906_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
erm
M03686_2.00 		Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA		 SELEX
Nitta et al.(2015)
CG31670_1 		0.778 0.870
erm
M06128_2.00 		Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM		 B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375 		0.778 0.870
erm
M06129_2.00 		Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV		 B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375 		0.778 0.870
FEZF1
M08307_2.00 		Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN		 ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE 		0.777 0.884
FEZF1
M08889_2.00 		Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH		 Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C 		0.777 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TMUE_s0065001300 C2H2 ZF 169 191
TMUE_s0065001300 C2H2 ZF 197 219
TMUE_s0065001300 C2H2 ZF 225 247
TMUE_s0065001300 C2H2 ZF 253 275
TMUE_s0065001300 C2H2 ZF 281 303
TMUE_s0065001300 C2H2 ZF 309 332

Links

Other C2H2 ZF family TFs
Other Trichuris muris TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF512 Ornithorhynchus anatinus ENSOANG00000005687 N 0.000
Tal_R000752 Tyto alba Tal_R000752 N 0.000
Myotis_brandtii_ZNF512_10031171 Myotis brandtii Myotis_brandtii_ZNF512_10031171 N 0.000
Aan_R008421 Calypte anna Aan_R008421 N 0.000
ENSTSYG00000006511 Tarsius syrichta ENSTSYG00000006511 N 0.000
ENSTRUG00000011596 Takifugu rubripes ENSTRUG00000011596 N 0.000
ZNF512 Taeniopygia guttata ENSTGUG00000014642 N 0.000
ZNF512 Sus scrofa ENSSSCG00000008545 N 0.000
ZNF512 Pteropus vampyrus ENSPVAG00000015218 N 0.000
ENSPSIG00000008225 Pelodiscus sinensis ENSPSIG00000008225 N 0.000
ZNF512 Oryctolagus cuniculus ENSOCUG00000013611 N 0.000
ZNF512 Anolis carolinensis ENSACAG00000009040 N 0.000
ZNF512 Myotis lucifugus ENSMLUG00000011855 N 0.000
ZNF512 Meleagris gallopavo ENSMGAG00000014063 N 0.000
ENSLOCG00000015845 Lepisosteus oculatus ENSLOCG00000015845 N 0.000
ZNF512 Gallus gallus ENSGALG00000016506 N 0.000
ENSFALG00000011302 Ficedula albicollis ENSFALG00000011302 N 0.000
Zfp512 Dipodomys ordii ENSDORG00000012164 N 0.000
ZNF512 Cavia porcellus ENSCPOG00000004356 N 0.000
ENSCAFG00000014496 Canis familiaris ENSCAFG00000014496 N 0.000
ENSAPLG00000003840 Anas platyrhynchos ENSAPLG00000003840 N 0.000