TMUE_s0106000200 (Trichuris muris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 TMUE_s0106000200 T157921_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Sp5
M09016_2.00 		Mus musculus
CYCCKCCYHYHBCYYHBYYYHYHB
VDRDRRRVDRRGVDRDRGGMGGRG		 Misc
Kulakovskiy et al.(2013)
SP5_MOUSE.H11MO.0.C 		0.797 0.884
SP5
M10319_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP5_Q2 		0.797 0.884
SP8
M02898_2.00 		Homo sapiens
VMCACBCCCMCH
DGKGGGVGTGKB		 SELEX
Jolma et al.(2013)
SP8_1 		0.794 0.884
SP8
M04517_2.00 		Homo sapiens
NMCMCGCCCMYH
DRKGGGCGKGKN		 SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX 		0.794 0.884
SP9
M04645_2.00 		Homo sapiens
VMCMCGCCCMYH
DRKGGGCGKGKB		 SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX 		0.794 0.884
SP8
M04518_2.00 		Homo sapiens
RHCACGCCCMYH
DRKGGGCGTGDY		 SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX 		0.794 0.884
SP9
M04646_2.00 		Homo sapiens
RYCACGCCCMYH
DRKGGGCGTGRY		 SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX 		0.794 0.884
Sp1
M03682_2.00 		Drosophila melanogaster
HNGCCACGCCCARK
MYTGGGCGTGGCND		 SELEX
Nitta et al.(2015)
Sp1_1 		0.781 0.870
Sp1
M06117_2.00 		Drosophila melanogaster
DHYMCGCCCMY
RKGGGCGKRDH		 B1H
Zhu et al.(2011)
Sp1_SANGER_5_FBgn0020378 		0.781 0.870
Sp1
M06118_2.00 		Drosophila melanogaster
NKHHMCGCCCMYNN
NNRKGGGCGKDDMN		 B1H
Zhu et al.(2011)
Sp1_SOLEXA_2.5_FBgn0020378 		0.781 0.870
Sp4
M01862_2.00 		Mus musculus
NMCGCCCMY
RKGGGCGKN		 PBM
Weirauch et al.(2014)
pTH4998 		0.765 0.841
Sp4
M00133_2.00 		Mus musculus
HMCGCCCMYN
NRKGGGCGKD		 PBM
Badis et al.(2009)
Sp4_1011 		0.765 0.841
Sp4
M05859_2.00 		Mus musculus
DGNYMCGCCCHNN
NNDGGGCGKRNCH		 SMiLE-seq
Isakova et al.(2017)
SP4 		0.765 0.841
Sp4
M08975_2.00 		Mus musculus
BYHDKCYCCGCCYYYHBSBB
VVSVDRRRGGCGGRGMHDRV		 Misc
Kulakovskiy et al.(2013)
SP4_MOUSE.H11MO.0.B 		0.765 0.841
Spps
M06159_2.00 		Drosophila melanogaster
KWDRCCMCGCCCMBH
DVKGGGCGKGGYHWM		 B1H
Zhu et al.(2011)
CG5669_SANGER_10_FBgn0039169 		0.761 0.797
Spps
M06160_2.00 		Drosophila melanogaster
BDDGCCMCGCCCMYN
NRKGGGCGKGGCHHV		 B1H
Zhu et al.(2011)
CG5669_SOLEXA_5_FBgn0039169 		0.761 0.797
Sp1
M00765_2.00 		Mus musculus
NMCGCCCMY
RKGGGCGKN		 PBM
Weirauch et al.(2013)
pTH0978 		0.761 0.826
Sp1
M08963_2.00 		Mus musculus
CCCBKCYCCKCCCCCNBCYCSBSC
GSVSGRGVNGGGGGMGGRGMVGGG		 Misc
Kulakovskiy et al.(2013)
SP1_MOUSE.H11MO.0.A 		0.761 0.826
SP1
M02921_2.00 		Homo sapiens
RCCMCDCCCMH
DKGGGHGKGGY		 SELEX
Jolma et al.(2013)
SP1_1 		0.757 0.812
SP1
M04605_2.00 		Homo sapiens
NWRRCCACGCCCMCH
DGKGGGCGTGGYYWN		 SELEX
Yin et al.(2017)
SP1_eDBD_HT-SELEX 		0.757 0.812
SP1
M08096_2.00 		Homo sapiens
BYCCCKCCCCY
RGGGGMGGGRV		 ChIP-seq
Mathelier et al.(2014)
MA0079.3 		0.757 0.812
SP1
M08363_2.00 		Homo sapiens
CCCHNBCYCCDCCCY
RGGGHGGRGVNDGGG		 ChIP-seq
Schmitges et al.(2016)
P08047.MEME 		0.757 0.812
SP1
M08938_2.00 		Homo sapiens
BCSSSBCCHVGCCCCGCCCCYN
NRGGGGCGGGGCBDGGVSSSGV		 Misc
Kulakovskiy et al.(2013)
SP1_HUMAN.H11MO.0.A 		0.757 0.812
SP1
M10294_2.00 		Homo sapiens
DSCMHGCCYH
DRGGCDKGSH		 Transfac
Matys et al.(2006)
V$SP1_01 		0.757 0.812
SP1
M10295_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_02 		0.757 0.812
SP1
M10296_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_07 		0.757 0.812
SP1
M10297_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_08 		0.757 0.812
SP1
M10298_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_Q2_02 		0.757 0.812
SP1
M10299_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_Q3 		0.757 0.812
SP1
M10300_2.00 		Homo sapiens
VVCCCCGCCCMBN
NVKGGGCGGGGBB		 Transfac
Matys et al.(2006)
V$SP1_Q6 		0.757 0.812
SP1
M04606_2.00 		Homo sapiens
NWRGCCMCGCCCMYH
DRKGGGCGKGGCYWN		 SELEX
Yin et al.(2017)
SP1_eDBD_Methyl-HT-SELEX 		0.757 0.812
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TMUE_s0106000200 C2H2 ZF 232 256
TMUE_s0106000200 C2H2 ZF 262 286
TMUE_s0106000200 C2H2 ZF 292 314

Links

Other C2H2 ZF family TFs
Other Trichuris muris TFs

433 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cebpd Mus musculus BAE29047.1 D
CEBPD Homo sapiens ENSG00000221869 D
Cebpd Rattus norvegicus ENSRNOG00000050869 D
ENSSTOG00000021236 Ictidomys tridecemlineatus ENSSTOG00000021236 I
CEBPD Otolemur garnettii ENSOGAG00000030449 I
ENSONIG00000021429 Oreochromis niloticus ENSONIG00000021429 I
ENSPANG00000024953 Papio anubis ENSPANG00000024953 I
ENSPFOG00000020361 Poecilia formosa ENSPFOG00000020361 I
ENSPPYG00000018572 Pongo abelii ENSPPYG00000018572 I
CEBPD Pan troglodytes ENSPTRG00000042020 I
ENSSSCG00000006276 Sus scrofa ENSSSCG00000006276 I
ENSOARG00000011169 Ovis aries ENSOARG00000011169 I
CEBPD Taeniopygia guttata ENSTGUG00000010839 I
cebpd Tetraodon nigroviridis ENSTNIG00000000222 I
ENSXMAG00000019437 Xiphophorus maculatus ENSXMAG00000019437 I
Cmyd_10014862 Chelonia mydas Cmyd_10014862 I
Pvit_15371 Pogona vitticeps Pvit_15371 I
cebpd.L Xenopus laevis XB-GENE-17330367 I
cebpd Xenopus tropicalis XB-GENE-853588 I
cebpd.S Xenopus laevis XB-GENE-866497 I
CEBPD Gorilla gorilla ENSGGOG00000008077 I
ENSAMXG00000025594 Astyanax mexicanus ENSAMXG00000025594 I
ENSAPLG00000002650 Anas platyrhynchos ENSAPLG00000002650 I
CEBPD Callithrix jacchus ENSCJAG00000013678 I
ENSCPOG00000025482 Cavia porcellus ENSCPOG00000025482 I
cebpd Danio rerio ENSDARG00000087303 I
CEBPD Dasypus novemcinctus ENSDNOG00000025666 I
ENSFALG00000014184 Ficedula albicollis ENSFALG00000014184 I
cebpd Gasterosteus aculeatus ENSGACG00000017927 I
ENSOCUG00000025135 Oryctolagus cuniculus ENSOCUG00000025135 I
ENSGMOG00000002585 Gadus morhua ENSGMOG00000002585 I
ENSLACG00000015084 Latimeria chalumnae ENSLACG00000015084 I
ENSLOCG00000017816 Lepisosteus oculatus ENSLOCG00000017816 I
CEBPD Macaca mulatta ENSMMUG00000013151 I
CEBPD Monodelphis domestica ENSMODG00000010525 I
ENSMPUG00000001146 Mustela putorius furo ENSMPUG00000001146 I
ENSOANG00000007261 Ornithorhynchus anatinus ENSOANG00000007261 I