TTRE_0000385401 (Trichuris trichiura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 TTRE_0000385401 T158249_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens-2
M06165_2.00 		Drosophila melanogaster
RYAAATCWSDGCAYNC
GNRTGCHSWGATTTRY		 B1H
Zhu et al.(2011)
sens-2_SANGER_2.5_FBgn0051632 		0.762 0.775
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TTRE_0000385401 C2H2 ZF 135 158
TTRE_0000385401 C2H2 ZF 164 186
TTRE_0000385401 C2H2 ZF 192 214
TTRE_0000385401 C2H2 ZF 220 242
TTRE_0000385401 C2H2 ZF 248 270
TTRE_0000385401 C2H2 ZF 276 299

Links

Other C2H2 ZF family TFs
Other Trichuris trichiura TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_3DS_31B0043F6 Triticum aestivum Traes_3DS_31B0043F6 N
Traes_6AS_E6F39D946 Triticum aestivum Traes_6AS_E6F39D946 N
Traes_6BS_938E60C80 Triticum aestivum Traes_6BS_938E60C80 N
Traes_6BS_945FD8DAC1 Triticum aestivum Traes_6BS_945FD8DAC1 N
Traes_6DS_E67EB0CBE Triticum aestivum Traes_6DS_E67EB0CBE N
Traes_7BS_E70858C081 Triticum aestivum Traes_7BS_E70858C081 N