CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
DICVIV_01967
(
Dictyocaulus viviparus
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
DICVIV_01967
T159621_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ztf-11
M00650_2.00
Caenorhabditis elegans
VAAGTTTN
NAAACTTB
PBM
Narasimhan et al.(2015)
pTH9925
0.947
0.947
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DICVIV_01967
C2HC ZF
423
450
ACPTPGCDGSGHQTGLYTHHRSLSGCPR
DICVIV_01967
C2HC ZF
469
497
RCTTPGCTGKGHVNSNRTSHRSLSGCPIA
Links
Other
C2HC ZF
family TFs
Other
Dictyocaulus viviparus
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPFOG00000008464
Poecilia formosa
ENSPFOG00000008464
N
LOC100911637
Rattus norvegicus
ENSRNOG00000048094
N
RGD1563668
Rattus norvegicus
ENSRNOG00000038478
N
LOC108350839
Rattus norvegicus
ENSRNOG00000038437
N
AABR07019870.1
Rattus norvegicus
ENSRNOG00000038033
N
Hmg1l1
Rattus norvegicus
ENSRNOG00000034130
N
Hmgb2
Rattus norvegicus
ENSRNOG00000033321
N
AABR07025074.1
Rattus norvegicus
ENSRNOG00000032550
N
Hmgb1-ps3
Rattus norvegicus
ENSRNOG00000032420
N
RGD1561694
Rattus norvegicus
ENSRNOG00000029107
N
Hmgb2l1
Rattus norvegicus
ENSRNOG00000013167
N
ENSPPYG00000011668
Pongo abelii
ENSPPYG00000011668
N
LOC100911637
Rattus norvegicus
ENSRNOG00000048471
N
ENSPANG00000011105
Papio anubis
ENSPANG00000011105
N
ENSPANG00000007527
Papio anubis
ENSPANG00000007527
N
ENSPANG00000005029
Papio anubis
ENSPANG00000005029
N
ENSONIG00000005505
Oreochromis niloticus
ENSONIG00000005505
N
ENSOGAG00000034801
Otolemur garnettii
ENSOGAG00000034801
N
ENSOGAG00000033437
Otolemur garnettii
ENSOGAG00000033437
N
ENSOGAG00000032325
Otolemur garnettii
ENSOGAG00000032325
N
ENSOGAG00000032240
Otolemur garnettii
ENSOGAG00000032240
N
ENSOGAG00000032152
Otolemur garnettii
ENSOGAG00000032152
N
ENSOGAG00000030563
Otolemur garnettii
ENSOGAG00000030563
N
ENSOGAG00000030052
Otolemur garnettii
ENSOGAG00000030052
N
hmgb1a
Takifugu rubripes
ENSTRUG00000008452
N
hmgb2.S
Xenopus laevis
XB-GENE-1000251
N
BAA06440
Xenopus laevis
BAA06440
N
AAH73449
Xenopus laevis
AAH73449
N
AAC59859
Xenopus laevis
AAC59859
N
Myotis_brandtii_Hmgb2_10018437
Myotis brandtii
Myotis_brandtii_Hmgb2_10018437
N
Myotis_brandtii_Hmgb1_10026956
Myotis brandtii
Myotis_brandtii_Hmgb1_10026956
N
Myotis_brandtii_Hmgb1_10003213
Myotis brandtii
Myotis_brandtii_Hmgb1_10003213
N
ENSMMUP00000039817
Macaca fascicularis
ENSMMUP00000039817
N
ENSBTAP00000049357-D1
Bos grunniens
ENSBTAP00000049357-D1
N
ENSXMAG00000006844
Xiphophorus maculatus
ENSXMAG00000006844
N
ENSTSYG00000012587
Tarsius syrichta
ENSTSYG00000012587
N
ENSOGAG00000029748
Otolemur garnettii
ENSOGAG00000029748
N
ENSTBEG00000016187
Tupaia belangeri
ENSTBEG00000016187
N
ENSTBEG00000015758
Tupaia belangeri
ENSTBEG00000015758
N
ENSTBEG00000015340
Tupaia belangeri
ENSTBEG00000015340
N
ENSTBEG00000014925
Tupaia belangeri
ENSTBEG00000014925
N
ENSTBEG00000012989
Tupaia belangeri
ENSTBEG00000012989
N
ENSTBEG00000009427
Tupaia belangeri
ENSTBEG00000009427
N
ENSTBEG00000005874
Tupaia belangeri
ENSTBEG00000005874
N
ENSTBEG00000005706
Tupaia belangeri
ENSTBEG00000005706
N
ENSSTOG00000000443
Ictidomys tridecemlineatus
ENSSTOG00000000443
N
AC135696.1
Rattus norvegicus
ENSRNOG00000058908
N
Hmg1l1
Rattus norvegicus
ENSRNOG00000051482
N
ENSDNOG00000041663
Dasypus novemcinctus
ENSDNOG00000041663
N
HMGB1
Microcebus murinus
ENSMICG00000006213
N
ENSMEUG00000011289
Macropus eugenii
ENSMEUG00000011289
N
ENSGGOG00000025109
Gorilla gorilla
ENSGGOG00000025109
N
ENSGGOG00000007804
Gorilla gorilla
ENSGGOG00000007804
N
hmgb1b
Gasterosteus aculeatus
ENSGACG00000011447
N
ENSFCAG00000028961
Felis catus
ENSFCAG00000028961
N
ENSECAG00000005186
Equus caballus
ENSECAG00000005186
N
ENSECAG00000003655
Equus caballus
ENSECAG00000003655
N
ENSDNOG00000047452
Dasypus novemcinctus
ENSDNOG00000047452
N
ENSDNOG00000046844
Dasypus novemcinctus
ENSDNOG00000046844
N
ENSDNOG00000042649
Dasypus novemcinctus
ENSDNOG00000042649
N
ENSMICG00000016224
Microcebus murinus
ENSMICG00000016224
N
ENSDNOG00000005537
Dasypus novemcinctus
ENSDNOG00000005537
N
hmgb1a
Danio rerio
ENSDARG00000099175
N
hmgb2a
Danio rerio
ENSDARG00000029722
N
ENSCPOG00000003985
Cavia porcellus
ENSCPOG00000003985
N
ENSCJAG00000022832
Callithrix jacchus
ENSCJAG00000022832
N
ENSCJAG00000014197
Callithrix jacchus
ENSCJAG00000014197
N
ENSCJAG00000008384
Callithrix jacchus
ENSCJAG00000008384
N
ENSCJAG00000008378
Callithrix jacchus
ENSCJAG00000008378
N
ENSCJAG00000007095
Callithrix jacchus
ENSCJAG00000007095
N
ENSCAFG00000023930
Canis familiaris
ENSCAFG00000023930
N
HMGB1
Bos taurus
ENSBTAG00000014862
N
ENSOARG00000017078
Ovis aries
ENSOARG00000017078
N
ENSOGAG00000028737
Otolemur garnettii
ENSOGAG00000028737
N
ENSOGAG00000028411
Otolemur garnettii
ENSOGAG00000028411
N
ENSOGAG00000028007
Otolemur garnettii
ENSOGAG00000028007
N
ENSOGAG00000027410
Otolemur garnettii
ENSOGAG00000027410
N
ENSOGAG00000024497
Otolemur garnettii
ENSOGAG00000024497
N
ENSOGAG00000010941
Otolemur garnettii
ENSOGAG00000010941
N
ENSOCUG00000027747
Oryctolagus cuniculus
ENSOCUG00000027747
N
ENSOCUG00000023449
Oryctolagus cuniculus
ENSOCUG00000023449
N
ENSOCUG00000021132
Oryctolagus cuniculus
ENSOCUG00000021132
N
ENSOCUG00000004133
Oryctolagus cuniculus
ENSOCUG00000004133
N
ENSOARG00000019147
Ovis aries
ENSOARG00000019147
N
ENSAMXG00000014832
Astyanax mexicanus
ENSAMXG00000014832
N
ENSOARG00000015955
Ovis aries
ENSOARG00000015955
N
ENSOARG00000015382
Ovis aries
ENSOARG00000015382
N
ENSOARG00000011611
Ovis aries
ENSOARG00000011611
N
ENSOARG00000010383
Ovis aries
ENSOARG00000010383
N
ENSMODG00000009238
Monodelphis domestica
ENSMODG00000009238
N
HMGB1
Monodelphis domestica
ENSMODG00000004443
N
HMGB2
Macaca mulatta
ENSMMUG00000020008
N
ENSMMUG00000019832
Macaca mulatta
ENSMMUG00000019832
N
ENSMMUG00000002662
Macaca mulatta
ENSMMUG00000002662
N
ENSMMUG00000001275
Macaca mulatta
ENSMMUG00000001275
N