SPAL_0000489100 (Strongyloides papillosus)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 SPAL_0000489100 T159678_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-11
M00650_2.00 		Caenorhabditis elegans
VAAGTTTN
NAAACTTB		 PBM
Narasimhan et al.(2015)
pTH9925 		0.860 0.860
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SPAL_0000489100.1 C2HC ZF 218 245
SPAL_0000489100.1 C2HC ZF 264 292

Links

Other C2HC ZF family TFs
Other Strongyloides papillosus TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB113 Arabidopsis thaliana AT1G66370 D 0.000
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I 0.000
PK17827.1 Cannabis sativa PK17827.1 I 0.000
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I 0.000
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I 0.000
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I 0.000
TCM_019192 Theobroma cacao TCM_019192 I 0.000
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I 0.000
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I 0.000
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I 0.000
Pm029442 Prunus mume Pm029442 I 0.000
Pm029445 Prunus mume Pm029445 I 0.000
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I 0.000
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I 0.000
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I 0.000
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I 0.000
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I 0.000
Carubv10020856m.g Capsella rubella Carubv10020856m.g I 0.000
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I 0.000
evm.TU.supercontig_116.38 Carica papaya evm.TU.supercontig_116.38 I 0.000
evm.TU.supercontig_2742.1 Carica papaya evm.TU.supercontig_2742.1 I 0.000
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I 0.000
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I 0.000
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I 0.000
PK05760.1 Cannabis sativa PK05760.1 I 0.000
MYB75 Arabidopsis thaliana AT1G56650 I 0.000
MTR_0247s0040 Medicago truncatula MTR_0247s0040 I 0.000
MYB114 Arabidopsis thaliana AT1G66380 I 0.000
MYB90 Arabidopsis thaliana AT1G66390 I 0.000
Bo00835s060 Brassica oleracea Bo00835s060 I 0.000
Bo6g099880 Brassica oleracea Bo6g099880 I 0.000
Bo6g100940 Brassica oleracea Bo6g100940 I 0.000
Bra001917 Brassica rapa Bra001917 I 0.000
Bra004162 Brassica rapa Bra004162 I 0.000
Bra039763 Brassica rapa Bra039763 I 0.000
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I 0.000
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I 0.000
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I 0.000
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I 0.000
MTR_5g078800 Medicago truncatula MTR_5g078800 I 0.000
MTR_5g078860 Medicago truncatula MTR_5g078860 I 0.000
MTR_5g078910 Medicago truncatula MTR_5g078910 I 0.000
MTR_5g078930 Medicago truncatula MTR_5g078930 I 0.000
MTR_5g078950 Medicago truncatula MTR_5g078950 I 0.000
MTR_5g079120 Medicago truncatula MTR_5g079120 I 0.000
MTR_5g079220 Medicago truncatula MTR_5g079220 I 0.000
MTR_5g079290 Medicago truncatula MTR_5g079290 I 0.000
MTR_7g017260 Medicago truncatula MTR_7g017260 I 0.000
MTR_8g060940 Medicago truncatula MTR_8g060940 I 0.000
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I 0.000