CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GNLVRS01_PISO0M07338g
(
Millerozyma farinosa
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02045 (CBFB_NFYA)
IPR001289
GNLVRS01_PISO0M07338g
T160030_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAP2
M08452_2.00
Saccharomyces cerevisiae
TTGGH
DCCAA
COMPILED
Mathelier et al.(2014)
MA0313.1
0.875
0.875
NFYA
M08104_2.00
Homo sapiens
NSTGATTGGYB
VRCCAATCASN
ChIP-seq
Mathelier et al.(2014)
MA0060.3
0.732
0.732
NFYA
M09018_2.00
Homo sapiens
YKBYSATTGGYYRV
BYRRCCAATSRVMR
Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A
0.732
0.732
Nfya
M09019_2.00
Mus musculus
YKBYSATTGGYYRV
BYRRCCAATSRVMR
Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A
0.732
0.732
NFYA
M10403_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFYA_02
0.732
0.732
NFYA
M10404_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFYA_Q5
0.732
0.732
NFYA
M10405_2.00
Homo sapiens
NYTGATTGGYTAVH
DBTARCCAATCARN
Transfac
Matys et al.(2006)
V$NFY_C
0.732
0.732
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCE85485
CBF/NF-Y
124
179
QPFYVNAKQYHRILKRRIARAKLEETLKIARTRKPYLHESRHKHAMRRPRGQGGRF
Links
Other
CBF/NF-Y
family TFs
Other
Millerozyma farinosa
TFs
440 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGGC5_12853
Colletotrichum gloeosporioides
CGGC5_12853
N
FGRRES_15866_M
Fusarium graminearum
FGRRES_15866_M
N
GLRG_10274
Colletotrichum graminicola
GLRG_10274
N
MAJ_07699
Metarhizium majus
MAJ_07699
N
MAM_06566
Metarhizium album
MAM_06566
N
MGU_09149
Metarhizium guizhouense
MGU_09149
N
MYCTH_2121737
Myceliophthora thermophila
MYCTH_2121737
N
S40285_01779
Stachybotrys chlorohalonata
S40285_01779
N
S40288_03960
Stachybotrys chartarum
S40288_03960
N
TRIVIDRAFT_232488
Trichoderma virens
TRIVIDRAFT_232488
N
UCRPA7_2621
Togninia minima
UCRPA7_2621
N
X797_008957
Metarhizium robertsii
X797_008957
N
estExt_Genewise1Plus.C_110567
Neurospora discreta
estExt_Genewise1Plus.C_110567
N