CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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How to cite
maker-par_contig_163-fgenesh-gene-0.7
(
Pythium arrhenomanes
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02045 (CBFB_NFYA)
IPR001289
maker-par_contig_163-fgenesh-gene-0.7
T160124_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAP2
M08452_2.00
Saccharomyces cerevisiae
TTGGH
DCCAA
COMPILED
Mathelier et al.(2014)
MA0313.1
0.714
0.714
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPR00000014994
CBF/NF-Y
93
148
EPVYVNAKQYHRIMIRRQQRAKLEAKLGAQRQRKAYLHASRHRHAMRRPRGPGGRF
Links
Other
CBF/NF-Y
family TFs
Other
Pythium arrhenomanes
TFs
96 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_07807
Capronia coronata
A1O1_07807
N
HMPREF1120_06644
Exophiala dermatitidis
HMPREF1120_06644
N
PV05_01526
Exophiala xenobiotica
PV05_01526
N
PV11_02578
Exophiala sideris
PV11_02578
N