Pavir.J24924 (Panicum virgatum)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02045 (CBFB_NFYA) IPR001289 Pavir.J24924 T160748_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J24924.1.p CBF/NF-Y 209 264
Pavir.J24924.2.p CBF/NF-Y 165 220

Links

Other CBF/NF-Y family TFs
Other Panicum virgatum TFs

502 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_04823 Aegilops tauschii F775_04823 I
GRMZM2G000818 Zea mays GRMZM2G000818 I
GRMZM2G124715 Zea mays GRMZM2G124715 I
MLOC_69570 Hordeum vulgare MLOC_69570 I
PGSC0003DMG400006176 Solanum tuberosum PGSC0003DMG400006176 I
AMTR_s00048p00210040 Amborella trichopoda AMTR_s00048p00210040 N
OB05G25260 Oryza brachyantha OB05G25260 N
ORGLA12G0042500 Oryza glaberrima ORGLA12G0042500 N
TRIUR3_23036 Triticum urartu TRIUR3_23036 N
TRIUR3_28515 Triticum urartu TRIUR3_28515 N
29816.m000664 Ricinus communis 29816.m000664 N
30225.m001697 Ricinus communis 30225.m001697 N
mgf021550m Mimulus guttatus mgf021550m N
MDP0000582174 Malus domestica MDP0000582174 N
Pavir.J22834 Panicum virgatum Pavir.J22834 N
SapurV1A.3841s0010 Salix purpurea SapurV1A.3841s0010 N