CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA15G15350
(
Glycine max
)
CG-1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03859 (CG-1)
IPR005559
GLYMA15G15350
T163198_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN
NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
0.912
0.912
Q2WEL1_ORYSA
M10406_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBT_01
0.719
0.719
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA15G15350.1
CG-1
32
146
EAKSRWLRPNEIHAILCNHKYFKINVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKTDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPTFVRRCYWLLDKNLEHIVLVHYRDT
GLYMA15G15350.2
CG-1
32
146
EAKSRWLRPNEIHAILCNHKYFKINVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKTDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPTFVRRCYWLLDKNLEHIVLVHYRDT
Links
Other
CG-1
family TFs
Other
Glycine max
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Arid2
Mus musculus
ENSMUSG00000033237
I
0.000
ENSTGUG00000006070
Taeniopygia guttata
ENSTGUG00000006070
N
0.000
ENSONIG00000011901
Oreochromis niloticus
ENSONIG00000011901
N
0.000
ARID2
Procavia capensis
ENSPCAG00000015312
N
0.000
ENSPFOG00000011270
Poecilia formosa
ENSPFOG00000011270
N
0.000
ENSPPYG00000004433
Pongo abelii
ENSPPYG00000004433
N
0.000
ENSPSIG00000006686
Pelodiscus sinensis
ENSPSIG00000006686
N
0.000
ARID2
Pan troglodytes
ENSPTRG00000004853
N
0.000
Arid2
Rattus norvegicus
ENSRNOG00000004831
N
0.000
ARID2
Otolemur garnettii
ENSOGAG00000024418
N
0.000
arid2
Tetraodon nigroviridis
ENSTNIG00000005771
N
0.000
arid2
Takifugu rubripes
ENSTRUG00000004073
N
0.000
Aan_R012350
Calypte anna
Aan_R012350
N
0.000
Afo_R010305
Aptenodytes forsteri
Afo_R010305
N
0.000
Brh_R012991
Buceros rhinoceros
Brh_R012991
N
0.000
Gfo_R004053
Geospiza fortis
Gfo_R004053
N
0.000
Ogr00113
Ophisaurus gracilis
Ogr00113
N
0.000
arid2
Xenopus tropicalis
XB-GENE-6070950
N
0.000
ARID2
Anolis carolinensis
ENSACAG00000002402
N
0.000
ENSOARG00000019554
Ovis aries
ENSOARG00000019554
N
0.000
ARID2
Meleagris gallopavo
ENSMGAG00000009656
N
0.000
ENSLOCG00000016423
Lepisosteus oculatus
ENSLOCG00000016423
N
0.000
ENSGMOG00000016013
Gadus morhua
ENSGMOG00000016013
N
0.000
ARID2
Gorilla gorilla
ENSGGOG00000013896
N
0.000
ENSGALG00000009665
Gallus gallus
ENSGALG00000009665
N
0.000
arid2
Gasterosteus aculeatus
ENSGACG00000019522
N
0.000
ARID2
Homo sapiens
ENSG00000189079
N
0.000
ARID2
Felis catus
ENSFCAG00000012831
N
0.000
ENSFALG00000010156
Ficedula albicollis
ENSFALG00000010156
N
0.000
arid2
Danio rerio
ENSDARG00000007413
N
0.000
ARID2
Canis familiaris
ENSCAFG00000009335
N
0.000
ENSAPLG00000010567
Anas platyrhynchos
ENSAPLG00000010567
N
0.000
ENSAMXG00000012189
Astyanax mexicanus
ENSAMXG00000012189
N
0.000
ENSAMEG00000013404
Ailuropoda melanoleuca
ENSAMEG00000013404
N
0.000