Carubv10022369m.g (Capsella rubella)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 Carubv10022369m.g T163505_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10022369m CG-1 46 160

Links

Other CG-1 family TFs
Other Capsella rubella TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.H04623 Eucalyptus grandis Eucgr.H04623 N 0.719
Cla000701 Citrullus lanatus Cla000701 N 0.702
Pm007031 Prunus mume Pm007031 N 0.737
cassava42936.valid.m1 Manihot esculenta cassava42936.valid.m1 N 0.711
cassava6546.valid.m1 Manihot esculenta cassava6546.valid.m1 N 0.746
Cucsa.349690 Cucumis sativus Cucsa.349690 N 0.772
mgf025436m Mimulus guttatus mgf025436m N 0.746
Cagra.1125s0011 Capsella grandiflora Cagra.1125s0011 N 0.991
Ciclev10030636m.g Citrus clementina Ciclev10030636m.g N 0.772
Ca_08511 Cicer arietinum Ca_08511 N 0.737
evm.TU.supercontig_43.77 Carica papaya evm.TU.supercontig_43.77 N 0.763
Gorai.009G332200 Gossypium raimondii Gorai.009G332200 N 0.719
MDP0000262800 Malus domestica MDP0000262800 N 0.719
orange1.1g044976m.g Citrus sinensis orange1.1g044976m.g N 0.772
SapurV1A.1172s0010 Salix purpurea SapurV1A.1172s0010 N 0.728
SapurV1A.1460s0040 Salix purpurea SapurV1A.1460s0040 N 0.728
Thhalv10018053m.g Eutrema salsugineum Thhalv10018053m.g N 0.851
PK06349.1 Cannabis sativa PK06349.1 N 0.702
GSMUA_Achr9G01330_001 Musa acuminata GSMUA_Achr9G01330_001 N 0.702
Bo2g055720 Brassica oleracea Bo2g055720 N 0.833
Bo6g099030 Brassica oleracea Bo6g099030 N 0.825
Bo6g103720 Brassica oleracea Bo6g103720 N 0.798
Bra004096 Brassica rapa Bra004096 N 0.816
Bra004217 Brassica rapa Bra004217 N 0.798
Bra034007 Brassica rapa Bra034007 N 0.842
fgenesh1_pm.C_scaffold_2000778 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000778 N 0.939
GLYMA05G28090 Glycine max GLYMA05G28090 N 0.737
CMTA4 Arabidopsis thaliana AT1G67310 N 0.912
MTR_8g080800 Medicago truncatula MTR_8g080800 N 0.737
POPTR_0001s13700 Populus trichocarpa POPTR_0001s13700 N 0.728
PRUPE_ppa000516mg Prunus persica PRUPE_ppa000516mg N 0.737
Solyc05g015650.2 Solanum lycopersicum Solyc05g015650.2 N 0.719
Solyc12g035520.1 Solanum lycopersicum Solyc12g035520.1 N 0.711
TCM_008731 Theobroma cacao TCM_008731 N 0.711
VIT_01s0010g03850 Vitis vinifera VIT_01s0010g03850 N 0.728