Lus10041704.g (Linum usitatissimum)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 Lus10041704.g T163552_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CMTA2
M01901_2.00 		Arabidopsis thaliana
NNDVCGYGT
ACRCGBHNN		 PBM
Weirauch et al.(2014)
pTH7506 		0.798 0.798
EICBP.B
M06828_2.00 		Arabidopsis thaliana
DARVCGCGTKDD
HHMACGCGBYTH		 Dap-seq
OMalley et al.(2016)
CAMTA1_col_a 		0.781 0.781
CMTA3
M01900_2.00 		Arabidopsis thaliana
VCGYGTNNN
NNNACRCGB		 PBM
Weirauch et al.(2014)
pTH8209 		0.763 0.763
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10041704 CG-1 25 139

Links

Other CG-1 family TFs
Other Linum usitatissimum TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MLOC_10221 Hordeum vulgare MLOC_10221 I
Gorai.004G263900 Gossypium raimondii Gorai.004G263900 I
Gorai.001G140000 Gossypium raimondii Gorai.001G140000 I
PDK_20s1310831g003 Phoenix dactylifera PDK_20s1310831g003 N
BGIOSGA023403 Oryza indica BGIOSGA023403 N
LjSGA_007141.1 Lotus japonicus LjSGA_007141.1 N
Thhalv10011985m.g Eutrema salsugineum Thhalv10011985m.g N
Lus10015653.g Linum usitatissimum Lus10015653.g N
Lus10011731.g Linum usitatissimum Lus10011731.g N
30170.m013668 Ricinus communis 30170.m013668 N
29562.m000029 Ricinus communis 29562.m000029 N
Traes_7DL_FBE71A7AE Triticum aestivum Traes_7DL_FBE71A7AE N
Traes_7BL_9FED7F55E Triticum aestivum Traes_7BL_9FED7F55E N
Traes_7AL_C5F8733D0 Triticum aestivum Traes_7AL_C5F8733D0 N
Traes_4BL_21E038CCB Triticum aestivum Traes_4BL_21E038CCB N
Traes_4AS_A1A963CC4 Triticum aestivum Traes_4AS_A1A963CC4 N
Traes_3AL_7ECC5258D Triticum aestivum Traes_3AL_7ECC5258D N
Traes_2DL_490C926F8 Triticum aestivum Traes_2DL_490C926F8 N
PGSC0003DMG401009171 Solanum tuberosum PGSC0003DMG401009171 N
OS02G0614300 Oryza sativa OS02G0614300 N
ORUFI06G25070 Oryza rufipogon ORUFI06G25070 N
ONIVA04G16290 Oryza nivara ONIVA04G16290 N
OLONG_000238 Oryza longistaminata OLONG_000238 N
OBART04G27840 Oryza barthii OBART04G27840 N
OBART04G17940 Oryza barthii OBART04G17940 N
OB03G24880 Oryza brachyantha OB03G24880 N
OB01G49350 Oryza brachyantha OB01G49350 N
MLOC_70927 Hordeum vulgare MLOC_70927 N
MLOC_51604 Hordeum vulgare MLOC_51604 N