Thhalv10020047m.g (Eutrema salsugineum)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 Thhalv10020047m.g T163600_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CAMTA5
M06827_2.00 		Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN
NACRCGBNDHNNACRCBN		 Dap-seq
OMalley et al.(2016)
CAMTA5_col_a 		0.851 0.851
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10020047m CG-1 31 145
Thhalv10020070m CG-1 4 118

Links

Other CG-1 family TFs
Other Eutrema salsugineum TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw.4.260.1_CONSTRUCT PBM CONSTRUCTS e_gw.4.260.1_CONSTRUCT D
CapteG220448 Capitella teleta CapteG220448 I
ENSPMAG00000009067 Petromyzon marinus ENSPMAG00000009067 I
NEMVEDRAFT_v1g81183 Nematostella vectensis NEMVEDRAFT_v1g81183 I
SINV22144 Solenopsis invicta SINV22144 I
XP_002159148.1 Hydra magnipapillata XP_002159148.1 I
HelroG62031 Helobdella robusta HelroG62031 N
RPRC013496 Rhodnius prolixus RPRC013496 N