CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
HPODL_01037
(
Ogataea parapolymorpha
)
Copper fist
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00649 (Copper-fist)
IPR001083
HPODL_01037
T163870_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAA1
M08553_2.00
Saccharomyces cerevisiae
SMGGSG
CSCCKS
Misc
DeBoer et al.(2011)
YPR008W_1425
0.897
0.897
CUP2
M08549_2.00
Saccharomyces cerevisiae
TCTTTTGCTG
CAGCAAAAGA
Misc
DeBoer et al.(2011)
YGL166W_48.1
0.718
0.718
CUP2
M08550_2.00
Saccharomyces cerevisiae
TCTTTTTGCTG
CAGCAAAAAGA
Misc
DeBoer et al.(2011)
YGL166W_48.2
0.718
0.718
CUP2
M08551_2.00
Saccharomyces cerevisiae
TCTTTTTTGCTG
CAGCAAAAAAGA
Misc
DeBoer et al.(2011)
YGL166W_48.3
0.718
0.718
CUP2
M10408_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CUP2_Q4
0.718
0.718
CUP2
M08453_2.00
Saccharomyces cerevisiae
CWTTTYYGCTG
CAGCRRAAAWG
COMPILED
Mathelier et al.(2014)
MA0287.1
0.718
0.718
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESX00155
Copper fist
2
40
VLINGVKYACERCIRGHRVTTCTHVDQPMMMIKPKGRPS
Links
Other
Copper fist
family TFs
Other
Ogataea parapolymorpha
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HAA1
Saccharomyces cerevisiae
YPR008W
D
0.897
CUP2
Saccharomyces cerevisiae
YGL166W
D
0.718
LALA0_S09e06546g
Lachancea lanzarotensis
LALA0_S09e06546g
I
0.872
KUCA_T00002063001
Kuraishia capsulata
KUCA_T00002063001
I
0.795
LELG_03555
Lodderomyces elongisporus
LELG_03555
I
0.897
NCAS_0B05730
Naumovozyma castellii
NCAS_0B05730
I
0.923
NDAI_0B03070
Naumovozyma dairenensis
NDAI_0B03070
I
0.923
PAS_chr3_0232
Komagataella pastoris
PAS_chr3_0232
I
0.872
PGUG_05595
Meyerozyma guilliermondii
PGUG_05595
I
0.872
PICST_66716
Scheffersomyces stipitis
PICST_66716
I
0.897
SKUD_166403
Saccharomyces kudriavzevii
SKUD_166403
I
0.897
SU7_3622
Saccharomyces arboricola
SU7_3622
I
0.897
TBLA_0C00170
Tetrapisispora blattae
TBLA_0C00170
I
0.872
TDEL_0C01350
Torulaspora delbrueckii
TDEL_0C01350
I
0.897
TPHA_0D00690
Tetrapisispora phaffii
TPHA_0D00690
I
0.897
YALI0_B08206g
Yarrowia lipolytica
YALI0_B08206g
I
0.718
ZBAI_01494
Zygosaccharomyces bailii
ZBAI_01494
I
0.923
ZYRO0F04862g
Zygosaccharomyces rouxii
ZYRO0F04862g
I
0.923
estExt_fgenesh1_pg.C_chr_1.20386
Pichia stipitis
estExt_fgenesh1_pg.C_chr_1.20386
I
0.897
Scas_Contig710.11
Saccharomyces castellii
Scas_Contig710.11
I
0.923
22312_YPR008W
Saccharomyces mikatae
22312_YPR008W
I
0.897
23384_YPR008W
Saccharomyces paradoxus
23384_YPR008W
I
0.897
25568_YPR008W
Saccharomyces bayanus
25568_YPR008W
I
0.897
KLTH0G16984g
Kluyveromyces thermotolerans
KLTH0G16984g
I
0.872
Kwal_1543
Kluyveromyces waltii
Kwal_1543
I
0.872
SAKL0B03344g
Lachancea kluyveri
SAKL0B03344g
I
0.923
XP_002492448.1
Pichia pastoris
XP_002492448.1
I
0.872
DEHA2D05500g
Debaryomyces hansenii
DEHA2D05500g
I
0.897
CPAG_03050
Candida parapsilosis
CPAG_03050
I
0.846
PGUG_05595
Candida guilliermondii
PGUG_05595
I
0.872
AACERI_AaceriAEL295C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAEL295C
I
0.897
AGOS_AEL295C
Ashbya gossypii
AGOS_AEL295C
I
0.897
BN7_4399
Wickerhamomyces ciferrii
BN7_4399
I
0.897
CAGL0L09339g
Candida glabrata
CAGL0L09339g
I
0.923
CANTEDRAFT_114577
Candida tenuis
CANTEDRAFT_114577
I
0.795
CaO19.12468
Candida albicans
CaO19.12468
I
0.795
CaO19.5001
Candida albicans
CaO19.5001
I
0.795
CD36_12620
Candida dubliniensis
CD36_12620
I
0.795
CLUG_03246
Clavispora lusitaniae
CLUG_03246
I
0.795
CORT_0D01560
Candida orthopsilosis
CORT_0D01560
I
0.846
CTRG_03632
Candida tropicalis
CTRG_03632
I
0.795
CLUG_03246
Candida lusitaniae
CLUG_03246
I
0.795
Ecym_6116
Eremothecium cymbalariae
Ecym_6116
I
0.897
G210_3644
Candida maltosa
G210_3644
I
0.795
GNLVRS01_PISO0A06138g
Millerozyma farinosa
GNLVRS01_PISO0A06138g
I
0.872
GNLVRS01_PISO0B06205g
Millerozyma farinosa
GNLVRS01_PISO0B06205g
I
0.872
JL09_g2035
Pichia kudriavzevii
JL09_g2035
I
0.949
JL09_g5487
Pichia kudriavzevii
JL09_g5487
I
0.949
KAFR_0B01950
Kazachstania africana
KAFR_0B01950
I
0.872
KLLA0_A03047g
Kluyveromyces lactis
KLLA0_A03047g
I
0.897
KLTH0G16984g
Lachancea thermotolerans
KLTH0G16984g
I
0.872
KNAG_0D02340
Kazachstania naganishii
KNAG_0D02340
I
0.897
Kpol_467p5
Vanderwaltozyma polyspora
Kpol_467p5
I
0.821
Kpol_541p30
Vanderwaltozyma polyspora
Kpol_541p30
I
0.949