CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TPHA_0I02450
(
Tetrapisispora phaffii
)
Copper fist
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00649 (Copper-fist)
IPR001083
TPHA_0I02450
T164093_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MAC1
M08552_2.00
Saccharomyces cerevisiae
TTTGCTCR
YGAGCAAA
Misc
DeBoer et al.(2011)
YMR021C_1540
0.744
0.744
MAC1
M10409_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MAC1_Q6_01
0.744
0.744
MAC1
M10410_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MAC1_Q6
0.744
0.744
MAC1
M08454_2.00
Saccharomyces cerevisiae
TTTGCTCR
YGAGCAAA
COMPILED
Mathelier et al.(2014)
MA0326.1
0.744
0.744
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCE64748
Copper fist
2
40
IIYQNDKYACVSCIRGHRSSTCKHTGRMLVKVRTRGRPT
Links
Other
Copper fist
family TFs
Other
Tetrapisispora phaffii
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA03G37740
Oryza nivara
ONIVA03G37740
N
Pavir.J22894
Panicum virgatum
Pavir.J22894
N
Pavir.Ia00502
Panicum virgatum
Pavir.Ia00502
N
TRIUR3_01385
Triticum urartu
TRIUR3_01385
N
Si036035m.g
Setaria italica
Si036035m.g
N
Sb01g006050
Sorghum bicolor
Sb01g006050
N
OS03G0785200
Oryza sativa
OS03G0785200
N
ORUFI03G38040
Oryza rufipogon
ORUFI03G38040
N
ORGLA03G0335300
Oryza glaberrima
ORGLA03G0335300
N
BGIOSGA009697
Oryza indica
BGIOSGA009697
N
OLONG_023271
Oryza longistaminata
OLONG_023271
N
OGLUM03G36240
Oryza glumaepatula
OGLUM03G36240
N
OBART03G36580
Oryza barthii
OBART03G36580
N
OB03G43430
Oryza brachyantha
OB03G43430
N
MLOC_55658
Hordeum vulgare
MLOC_55658
N
LPERR03G30840
Leersia perrieri
LPERR03G30840
N
BRADI1G06490
Brachypodium distachyon
BRADI1G06490
N