ENSPPYG00000001466 (Pongo abelii)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSPPYG00000001466 T164750_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.828 0.828
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.828 0.828
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.828 0.828
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.828 0.828
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000001698 CSD 59 116

Links

Other CSD family TFs
Other Pongo abelii TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_04823 Aegilops tauschii F775_04823 I
GRMZM2G000818 Zea mays GRMZM2G000818 I
GRMZM2G016020 Zea mays GRMZM2G016020 I
GRMZM2G129872 Zea mays GRMZM2G129872 I
MLOC_69570 Hordeum vulgare MLOC_69570 I
Lus10033438.g Linum usitatissimum Lus10033438.g I
Cagra.0551s0003 Capsella grandiflora Cagra.0551s0003 I
Pm029437 Prunus mume Pm029437 N
PDK_20s1587411g001 Phoenix dactylifera PDK_20s1587411g001 N
SapurV1A.3841s0010 Salix purpurea SapurV1A.3841s0010 N
SapurV1A.0553s0120 Salix purpurea SapurV1A.0553s0120 N
MDP0000317257 Malus domestica MDP0000317257 N
MDP0000127691 Malus domestica MDP0000127691 N
evm.TU.supercontig_1961.1 Carica papaya evm.TU.supercontig_1961.1 N
Eucgr.F02843 Eucalyptus grandis Eucgr.F02843 N
29739.m003608 Ricinus communis 29739.m003608 N
29706.m001290 Ricinus communis 29706.m001290 N
AMTR_s00048p00210040 Amborella trichopoda AMTR_s00048p00210040 N
TRIUR3_23036 Triticum urartu TRIUR3_23036 N
TRIUR3_10933 Triticum urartu TRIUR3_10933 N
SELMODRAFT_39516 Selaginella moellendorffii SELMODRAFT_39516 N
SELMODRAFT_39507 Selaginella moellendorffii SELMODRAFT_39507 N
ORUFI03G21780 Oryza rufipogon ORUFI03G21780 N
BGIOSGA022508 Oryza indica BGIOSGA022508 N