Brh_R007443 (Buceros rhinoceros)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 Brh_R007443 T165289_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		1.000 1.000
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		1.000 1.000
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		1.000 1.000
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		1.000 1.000
NEMVEDRAFT_v1g104083
M01207_2.00 		Nematostella vectensis
NNNDDHRN
NYDHHNNN		 PBM
Lambert et al.(2019)
pTH9768 		0.818 0.818
cey-1
M01903_2.00 		Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN		 PBM
Weirauch et al.(2014)
pTH8991 		0.773 0.773
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R007443 CSD 4 73

Links

Other CSD family TFs
Other Buceros rhinoceros TFs

411 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla011742 Citrullus lanatus Cla011742 I
Aquca_005_00384 Aquilegia coerulea Aquca_005_00384 N
Aquca_013_00314 Aquilegia coerulea Aquca_013_00314 N
Aquca_017_00101 Aquilegia coerulea Aquca_017_00101 N
Aquca_047_00092 Aquilegia coerulea Aquca_047_00092 N
Aquca_056_00046 Aquilegia coerulea Aquca_056_00046 N