ENSMMUP00000017257 (Macaca fascicularis)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 ENSMMUP00000017257 T165307_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.985 0.985
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.985 0.985
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.985 0.985
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.985 0.985
NEMVEDRAFT_v1g104083
M01207_2.00 		Nematostella vectensis
NNNDDHRN
NYDHHNNN		 PBM
Lambert et al.(2019)
pTH9768 		0.803 0.803
cey-1
M01903_2.00 		Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN		 PBM
Weirauch et al.(2014)
pTH8991 		0.758 0.758
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000017257 CSD 5 74

Links

Other CSD family TFs
Other Macaca fascicularis TFs

360 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATY13 Arabidopsis thaliana AT1G74650 D
GLYMA14G10483 Glycine max GLYMA14G10483 I
Gorai.001G024300 Gossypium raimondii Gorai.001G024300 I
Gorai.007G268800 Gossypium raimondii Gorai.007G268800 I
orange1.1g019307m.g Citrus sinensis orange1.1g019307m.g I
SapurV1A.0890s0050 Salix purpurea SapurV1A.0890s0050 I
SapurV1A.3377s0010 Salix purpurea SapurV1A.3377s0010 I
cassava2662.m1 Manihot esculenta cassava2662.m1 N
MDP0000268980 Malus domestica MDP0000268980 N