CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10034487.g
(
Linum usitatissimum
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
Lus10034487.g
T165466_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CSP4
M01902_2.00
Arabidopsis thaliana
AAWAAAAM
KTTTTWTT
PBM
Weirauch et al.(2014)
pTH7494
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10034487
CSD
5
54
LSGRVKWFNDQKGYGFITPNDGSEDLFVHQSSIQTEGFRSLAEDEEAIDV
Links
Other
CSD
family TFs
Other
Linum usitatissimum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g141510
Brassica oleracea
Bo3g141510
I
0.702
PK26692.1
Cannabis sativa
PK26692.1
I
0.766
mgf001526m
Mimulus guttatus
mgf001526m
N
0.723
mgf014458m
Mimulus guttatus
mgf014458m
N
0.723
Lus10025058.g
Linum usitatissimum
Lus10025058.g
N
0.712