RBPJ (Vicugna pacos)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 ENSVPAG00000003620 T166142_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.959 0.959
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.959 0.959
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.959 0.959
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.959 0.959
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.959 0.959
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.959 0.959
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.959 0.959
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.959 0.959
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.959 0.959
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.959 0.959
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.959 0.959
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.959 0.959
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.959 0.959
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000003356 CSL 28 108

Links

Other CSL family TFs
Other Vicugna pacos TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GTF2IRD1 Homo sapiens ENSG00000006704 D 0.000
Afo_R005311 Aptenodytes forsteri Afo_R005311 I 0.000
ENSPSIG00000012562 Pelodiscus sinensis ENSPSIG00000012562 I 0.000
GTF2IRD1 Pan troglodytes ENSPTRG00000019292 I 0.000
Gtf2ird1 Rattus norvegicus ENSRNOG00000001478 I 0.000
LOC100912262 Rattus norvegicus ENSRNOG00000050193 I 0.000
GTF2IRD1 Sus scrofa ENSSSCG00000007720 I 0.000
ENSSTOG00000014343 Ictidomys tridecemlineatus ENSSTOG00000014343 I 0.000
GTF2IRD1 Tupaia belangeri ENSTBEG00000014017 I 0.000
GTF2IRD1 Taeniopygia guttata ENSTGUG00000003638 I 0.000
gtf2ird1 Tetraodon nigroviridis ENSTNIG00000004695 I 0.000
gtf2ird1 Takifugu rubripes ENSTRUG00000010068 I 0.000
ENSXMAG00000015294 Xiphophorus maculatus ENSXMAG00000015294 I 0.000
Aan_R007261 Calypte anna Aan_R007261 I 0.000
ENSPFOG00000001233 Poecilia formosa ENSPFOG00000001233 I 0.000
Alligator_sinensis_CCG003099.1 Alligator sinensis Alligator_sinensis_CCG003099.1 I 0.000
Brh_R010572 Buceros rhinoceros Brh_R010572 I 0.000
Cmyd_10014806 Chelonia mydas Cmyd_10014806 I 0.000
ENSP00000397566 Macaca fascicularis ENSP00000397566 I 0.000
Gfo_R013537 Geospiza fortis Gfo_R013537 I 0.000
Myotis_brandtii_GTF2IRD1_10014286 Myotis brandtii Myotis_brandtii_GTF2IRD1_10014286 I 0.000
Pvit_17519 Pogona vitticeps Pvit_17519 I 0.000
Tal_R007678 Tyto alba Tal_R007678 I 0.000
B7ZQJ9 Xenopus laevis B7ZQJ9 I 0.000
gtf2ird1 Xenopus tropicalis XB-GENE-5857402 I 0.000
gtf2ird1.S Xenopus laevis XB-GENE-5857419 I 0.000
ENSLOCG00000002184 Lepisosteus oculatus ENSLOCG00000002184 I 0.000
ENSAMXG00000007482 Astyanax mexicanus ENSAMXG00000007482 I 0.000
ENSAPLG00000006811 Anas platyrhynchos ENSAPLG00000006811 I 0.000
GTF2IRD1 Bos taurus ENSBTAG00000006212 I 0.000
GTF2IRD1 Canis familiaris ENSCAFG00000011763 I 0.000
gtf2ird1 Danio rerio ENSDARG00000022203 I 0.000
GTF2IRD1 Dasypus novemcinctus ENSDNOG00000024296 I 0.000
GTF2IRD1 Equus caballus ENSECAG00000019745 I 0.000
GTF2IRD1 Felis catus ENSFCAG00000006551 I 0.000
gtf2ird1 Gasterosteus aculeatus ENSGACG00000020844 I 0.000
GTF2IRD1 Gallus gallus ENSGALG00000001263 I 0.000
ENSGMOG00000013638 Gadus morhua ENSGMOG00000013638 I 0.000
ENSLACG00000018407 Latimeria chalumnae ENSLACG00000018407 I 0.000
ENSPPYG00000017485 Pongo abelii ENSPPYG00000017485 I 0.000
ENSMEUG00000012139 Macropus eugenii ENSMEUG00000012139 I 0.000
GTF2IRD1 Meleagris gallopavo ENSMGAG00000016801 I 0.000
GTF2IRD1 Myotis lucifugus ENSMLUG00000001668 I 0.000
GTF2IRD1 Macaca mulatta ENSMMUG00000018842 I 0.000
ENSMPUG00000016153 Mustela putorius furo ENSMPUG00000016153 I 0.000
Gtf2ird1 Mus musculus ENSMUSG00000023079 I 0.000
ENSOARG00000011517 Ovis aries ENSOARG00000011517 I 0.000
GTF2IRD1 Oryctolagus cuniculus ENSOCUG00000026916 I 0.000
GTF2IRD1 Otolemur garnettii ENSOGAG00000013029 I 0.000
gtf2ird1 Oryzias latipes ENSORLG00000015316 I 0.000
ENSAMEG00000015311 Ailuropoda melanoleuca ENSAMEG00000015311 I 0.000