CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RPRC014254
(
Rhodnius prolixus
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09271 (LAG1-DNAbind)
IPR015351
RPRC014254
T166253_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Su(H)
M10415_2.00
Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB
Transfac
Matys et al.(2006)
I$SUH_01
0.786
0.786
Su(H)
M08455_2.00
Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD
COMPILED
Mathelier et al.(2014)
MA0085.1
0.786
0.786
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
0.709
0.709
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN
NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
0.709
0.709
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
0.709
0.709
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN
NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
0.709
0.709
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN
NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
0.709
0.709
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN
NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
0.709
0.709
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
0.709
0.709
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB
VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
0.709
0.709
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN
NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
0.709
0.709
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
0.709
0.709
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV
BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
0.709
0.709
RBPJ
M10413_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
0.709
0.709
RBPJ
M10414_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
0.709
0.709
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RPRC014254-PA
CSL
26
144
IVILHAKVAQKSYGNEKRFFCPPPCIYLYGEGWRLRQEQLLREGDSEHAAQLCAFIGIGNSDQDMQQLDLNNGKQYCAAKTLYISDSDKRKHFMLSVKMFYGSGHDIGVFQTSGTKVAL
Links
Other
CSL
family TFs
Other
Rhodnius prolixus
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Su(H)
Drosophila melanogaster
FBgn0004837
D
0.786
RBPJ
Homo sapiens
ENSG00000168214
D
0.875
Sjc_0108400
Schistosoma japonicum
Sjc_0108400
I
0.833
AFUN007280
Anopheles funestus
AFUN007280
I
0.718
AFAF012186
Anopheles farauti
AFAF012186
I
0.718
ADIR011431
Anopheles dirus
ADIR011431
I
0.718
ACUA014515
Anopheles culicifacies
ACUA014515
I
0.718
ACOM040639
Anopheles coluzzii
ACOM040639
I
0.718
AATE009298
Anopheles atroparvus
AATE009298
I
0.710
AALB007981
Anopheles albimanus
AALB007981
I
0.710
AMIN005880
Anopheles minimus
AMIN005880
I
0.718
LDEC018359
Leptinotarsa decemlineata
LDEC018359
I
0.889
HHAL001644-PA
Halyomorpha halys
HHAL001644-PA
I
0.838
CLEC005205
Cimex lectularius
CLEC005205
I
0.854
Hsal_09918--XP_397309.1_APIME
Harpegnathos saltator
Hsal_09918--XP_397309.1_APIME
I
0.769
Cflo_01916--XP_397309.1_APIME
Camponotus floridanus
Cflo_01916--XP_397309.1_APIME
I
0.792
YQE_03219
Dendroctonus ponderosae
YQE_03219
I
0.800
AMEM004324
Anopheles merus
AMEM004324
I
0.718
SMAR001432
Strigamia maritima
SMAR001432
I
0.786
AQUA011533
Anopheles quadriannulatus
AQUA011533
I
0.702
ASTEI01929
Anopheles stephensi
ASTEI01929
I
0.702
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0
I
0.824
BTMF_0000429201
Brugia timori
BTMF_0000429201
I
0.714
D915_08967
Fasciola hepatica
D915_08967
I
0.833
ECPE_0001338601
Echinostoma caproni
ECPE_0001338601
I
0.714
GPLIN_001569000
Globodera pallida
GPLIN_001569000
I
0.765
NECAME_17145
Necator americanus
NECAME_17145
I
0.762
scaffold595-EXSNAP2012.9
Pristionchus exspectatus
scaffold595-EXSNAP2012.9
I
0.762
SCUD_0000326701
Schistosoma curassoni
SCUD_0000326701
I
0.833
SMRZ_0000802101
Schistosoma margrebowiei
SMRZ_0000802101
I
0.833
SMTD_0001089601
Schistosoma mattheei
SMTD_0001089601
I
0.833
TRE_0000568701
Trichobilharzia regenti
TRE_0000568701
I
0.833
GM15894
Drosophila sechellia
FBgn0170810
I
0.786
AAEL006419
Aedes aegypti
AAEL006419
I
0.740
ACEP17167
Atta cephalotes
ACEP17167
I
0.792
AGAP008935
Anopheles gambiae
AGAP008935
I
0.718
BGIBMGA003113
Bombyx mori
BGIBMGA003113
I
0.846
CPIJ004183
Culex quinquefasciatus
CPIJ004183
I
0.703
rbpja
Danio rerio
ENSDARG00000003398
I
0.727
ENSORLG00000006995
Oryzias latipes
ENSORLG00000006995
I
0.727
RBPJ
Vicugna pacos
ENSVPAG00000003620
I
0.726
ENSVPAG00000005031
Vicugna pacos
ENSVPAG00000005031
I
0.889
Su(H)
Drosophila simulans
FBgn0027417
I
0.786
GF14905
Drosophila ananassae
FBgn0091930
I
0.786
GG25142
Drosophila erecta
FBgn0117267
I
0.786
GH10915
Drosophila grimshawi
FBgn0118396
I
0.786
GL26026
Drosophila persimilis
FBgn0163608
I
0.786
TC014468
Tribolium castaneum
TC014468
I
0.889
GJ11880
Drosophila virilis
FBgn0199134
I
0.786
GE20814
Drosophila yakuba
FBgn0238107
I
0.786
GA25242
Drosophila pseudoobscura
FBgn0246623
I
0.786
GA25243
Drosophila pseudoobscura
FBgn0246624
I
0.786
GB45655
Apis mellifera
GB45655
I
0.792
HMEL017244
Heliconius melpomene
HMEL017244
I
0.754
KGM_08407
Danaus plexippus
KGM_08407
I
0.754
L798_15068
Zootermopsis nevadensis
L798_15068
I
0.800
NV17858
Nasonia vitripennis
NV17858
I
0.738
PHUM462870
Pediculus humanus
PHUM462870
I
0.808
PPA16711
Pristionchus pacificus
PPA16711
I
0.714
SINV15808
Solenopsis invicta
SINV15808
I
0.792
CpipJ_CPIJ004183
Culex pipiens
CpipJ_CPIJ004183
I
0.703