CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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tetur11g06371
(
Tetranychus urticae
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09271 (LAG1-DNAbind)
IPR015351
tetur11g06371
T166277_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
0.739
0.739
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN
NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
0.739
0.739
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
0.739
0.739
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN
NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
0.739
0.739
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN
NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
0.739
0.739
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN
NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
0.739
0.739
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
0.739
0.739
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB
VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
0.739
0.739
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN
NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
0.739
0.739
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
0.739
0.739
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV
BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
0.739
0.739
RBPJ
M10413_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
0.739
0.739
RBPJ
M10414_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
0.739
0.739
Su(H)
M10415_2.00
Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB
Transfac
Matys et al.(2006)
I$SUH_01
0.725
0.725
Su(H)
M08455_2.00
Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD
COMPILED
Mathelier et al.(2014)
MA0085.1
0.725
0.725
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
tetur11g06371.1
CSL
3
71
GNFANLRLYIYSFCMAKTLFISDSDKRKHFMLSVKMFYSNSDDIGTFYSQRIKVISKPSKKKQSLKNTD
Links
Other
CSL
family TFs
Other
Tetranychus urticae
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Su(H)
Drosophila melanogaster
FBgn0004837
D
0.725
ACYPI009607
Acyrthosiphon pisum
ACYPI009607
I
0.710
PPAI000792
Phlebotomus papatasi
PPAI000792
I
0.725
ASTEI01929
Anopheles stephensi
ASTEI01929
I
0.710
AMEC017285
Anopheles melas
AMEC017285
I
0.710
AARA009493
Anopheles arabiensis
AARA009493
I
0.710
AALB007981
Anopheles albimanus
AALB007981
I
0.710
tetur11g00180
Tetranychus urticae
tetur11g00180
I
0.841
NV17858
Nasonia vitripennis
NV17858
I
0.710
MCINX002989
Melitaea cinxia
MCINX002989
I
0.710
L798_15068
Zootermopsis nevadensis
L798_15068
I
0.710
GA25243
Drosophila pseudoobscura
FBgn0246624
I
0.725
GA25242
Drosophila pseudoobscura
FBgn0246623
I
0.725
GE20814
Drosophila yakuba
FBgn0238107
I
0.725
GJ11880
Drosophila virilis
FBgn0199134
I
0.725
GM15894
Drosophila sechellia
FBgn0170810
I
0.725
GH10915
Drosophila grimshawi
FBgn0118396
I
0.725
AAEL006419
Aedes aegypti
AAEL006419
I
0.710
BGIBMGA003113
Bombyx mori
BGIBMGA003113
I
0.710
DAPPUDRAFT_98470
Daphnia pulex
DAPPUDRAFT_98470
I
0.739
rbpja
Danio rerio
ENSDARG00000003398
I
0.725
rbpjb
Danio rerio
ENSDARG00000052091
I
0.725
RBPJ
Meleagris gallopavo
ENSMGAG00000012418
I
0.739
RBPJ
Macaca mulatta
ENSMMUG00000015828
I
0.739
RBPJ
Monodelphis domestica
ENSMODG00000000129
I
0.739
ENSSHAG00000003329
Sarcophilus harrisii
ENSSHAG00000003329
I
0.739
Su(H)
Drosophila simulans
FBgn0027417
I
0.725
GF14905
Drosophila ananassae
FBgn0091930
I
0.725
GG25142
Drosophila erecta
FBgn0117267
I
0.725
GL26026
Drosophila persimilis
FBgn0163608
I
0.725
HNAJ_0000209001
Hymenolepis nana
HNAJ_0000209001
N
0.710
SPER_0003346601
Spirometra erinaceieuropaei
SPER_0003346601
N
0.710
TASK_0000348801
Taenia asiatica
TASK_0000348801
N
0.710