CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KDM2B
(
Bos taurus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSBTAG00000002328
T167848_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
1.000
1.000
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.979
0.979
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.894
0.894
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.851
0.851
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.809
0.809
BGIBMGA012843
M01907_2.00
Bombyx mori
NNCGCGTANVNN
NNBNTACGCGNN
PBM
Weirauch et al.(2014)
pTH9239
0.766
0.766
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.723
0.723
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000003003
CxxC
578
624
GARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMRQC
Links
Other
CxxC
family TFs
Other
Bos taurus
TFs
248 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZGLP1
Pan troglodytes
ENSPTRG00000034377
N
XP_002939716
Xenopus tropicalis
XP_002939716
N
Ocbimv22009847m.g
Octopus bimaculoides
Ocbimv22009847m.g
N
fgenesh2_pg.scaffold_435000011
Branchiostoma floridae
fgenesh2_pg.scaffold_435000011
N
fgenesh2_pg.scaffold_101000004
Branchiostoma floridae
fgenesh2_pg.scaffold_101000004
N
Pvit_11650
Pogona vitticeps
Pvit_11650
N
ENSP00000384434
Macaca fascicularis
ENSP00000384434
N
ENSBTAP00000049710-D1
Bos grunniens
ENSBTAP00000049710-D1
N
Cmyd_10002304
Chelonia mydas
Cmyd_10002304
N
SMAR009329
Strigamia maritima
SMAR009329
N
NEMVEDRAFT_v1g210481
Nematostella vectensis
NEMVEDRAFT_v1g210481
N
ZGLP1
Tursiops truncatus
ENSTTRG00000009549
N
ZGLP1
Sus scrofa
ENSSSCG00000025754
N
Zglp1
Rattus norvegicus
ENSRNOG00000042601
N
ZGLP1
Pteropus vampyrus
ENSPVAG00000003687
N
CapteG202256
Capitella teleta
CapteG202256
N
ZGLP1
Procavia capensis
ENSPCAG00000002619
N
ENSPANG00000005034
Papio anubis
ENSPANG00000005034
N
ZGLP1
Otolemur garnettii
ENSOGAG00000025914
N
ENSNLEG00000012171
Nomascus leucogenys
ENSNLEG00000012171
N
Zglp1
Mus musculus
ENSMUSG00000079681
N
ENSLOCG00000007686
Lepisosteus oculatus
ENSLOCG00000007686
N
ZGLP1
Gorilla gorilla
ENSGGOG00000006002
N
ZGLP1
Homo sapiens
ENSG00000220201
N
ZGLP1
Felis catus
ENSFCAG00000031808
N
zglp1
Danio rerio
ENSDARG00000067669
N
ENSCSAG00000007336
Chlorocebus sabaeus
ENSCSAG00000007336
N
ZGLP1
Callithrix jacchus
ENSCJAG00000005716
N
ZGLP1
Canis familiaris
ENSCAFG00000031603
N
ZGLP1
Bos taurus
ENSBTAG00000038976
N