CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FBXL19
(
Cavia porcellus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSCPOG00000022362
T167896_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.915
0.915
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.872
0.872
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.872
0.872
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.851
0.851
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.809
0.809
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.766
0.766
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000019304
CxxC
11
57
GARRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQC
Links
Other
CxxC
family TFs
Other
Cavia porcellus
TFs
211 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_062880
Acremonium chrysogenum
ACRE_062880
I
0.000
UCRPA7_6727
Togninia minima
UCRPA7_6727
I
0.000
CFIO01_10230
Colletotrichum fioriniae
CFIO01_10230
I
0.000
S40288_07855
Stachybotrys chartarum
S40288_07855
I
0.000
S40285_00620
Stachybotrys chlorohalonata
S40285_00620
I
0.000
M7I_4877
Glarea lozoyensis
M7I_4877
I
0.000
MAM_01947
Metarhizium album
MAM_01947
I
0.000
MGG_04758
Magnaporthe oryzae
MGG_04758
I
0.000
V499_03811
Pseudogymnoascus pannorum
V499_03811
N
0.000
SS1G_01411
Sclerotinia sclerotiorum
SS1G_01411
N
0.000
SBOR_6525
Sclerotinia borealis
SBOR_6525
N
0.000
PV08_02834
Exophiala spinifera
PV08_02834
N
0.000
PV06_02026
Exophiala oligosperma
PV06_02026
N
0.000
H072_7690
Dactylellina haptotyla
H072_7690
N
0.000
GMDG_05105
Pseudogymnoascus destructans
GMDG_05105
N
0.000
G647_05850
Cladophialophora carrionii
G647_05850
N
0.000
DRE_04796
Drechslerella stenobrocha
DRE_04796
N
0.000
CCM_06226
Cordyceps militaris
CCM_06226
N
0.000
Bcin02g04140
Botrytis cinerea
Bcin02g04140
N
0.000
AOL_s00078g326
Arthrobotrys oligospora
AOL_s00078g326
N
0.000