CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cxxc5a
(
Danio rerio
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSDARG00000078865
T167923_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CXXC5
M01210_2.00
Homo sapiens
NNNDCKNN
NNMGHNNN
PBM
Lambert et al.(2019)
pTH11216
0.976
0.976
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000112750
CxxC
217
258
SGKKKRKRCGMCPPCRRRINCEQCSSCRNRKTGHQICKFRKC
Links
Other
CxxC
family TFs
Other
Danio rerio
TFs
132 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GBF3
Arabidopsis thaliana
AT2G46270
D
PK09653.1
Cannabis sativa
PK09653.1
D
Bo4g010410
Brassica oleracea
Bo4g010410
I
Bra004550
Brassica rapa
Bra004550
I
GBF3
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_4002338
I
30174.m008698
Ricinus communis
30174.m008698
I
cassava29861.valid.m1
Manihot esculenta
cassava29861.valid.m1
I
cassava29862.valid.m1
Manihot esculenta
cassava29862.valid.m1
I
Carubv10023434m.g
Capsella rubella
Carubv10023434m.g
I
Gorai.007G105100
Gossypium raimondii
Gorai.007G105100
I
Pavir.Ea02315
Panicum virgatum
Pavir.Ea02315
I
Thhalv10001533m.g
Eutrema salsugineum
Thhalv10001533m.g
I