CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
FBXL19
(
Sus scrofa
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSSSCG00000028186
T168325_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.915
0.915
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.872
0.872
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.872
0.872
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.851
0.851
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.809
0.809
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.766
0.766
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000026270
CxxC
31
77
GARRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQC
Links
Other
CxxC
family TFs
Other
Sus scrofa
TFs
211 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ADNP
Tursiops truncatus
ENSTTRG00000009011
N
ADNP
Otolemur garnettii
ENSOGAG00000005381
N
ADNP
Ochotona princeps
ENSOPRG00000002985
N
ENSPANG00000021104
Papio anubis
ENSPANG00000021104
N
ADNP
Procavia capensis
ENSPCAG00000006836
N
ENSPSIG00000015209
Pelodiscus sinensis
ENSPSIG00000015209
N
ADNP
Pan troglodytes
ENSPTRG00000013623
N
ADNP
Pteropus vampyrus
ENSPVAG00000016481
N
Adnp
Rattus norvegicus
ENSRNOG00000010975
N
ADNP
Sorex araneus
ENSSARG00000008308
N
ENSSHAG00000018763
Sarcophilus harrisii
ENSSHAG00000018763
N
ADNP
Sus scrofa
ENSSSCG00000007473
N
ENSSTOG00000023722
Ictidomys tridecemlineatus
ENSSTOG00000023722
N
ADNP
Tupaia belangeri
ENSTBEG00000002890
N
ADNP
Taeniopygia guttata
ENSTGUG00000008662
N
ENSTSYG00000012059
Tarsius syrichta
ENSTSYG00000012059
N
ADNP
Oryctolagus cuniculus
ENSOCUG00000014704
N
ADNP
Vicugna pacos
ENSVPAG00000004917
N
Aan_R015824
Calypte anna
Aan_R015824
N
Afo_R003260
Aptenodytes forsteri
Afo_R003260
N
Alligator_sinensis_CCG001710.1
Alligator sinensis
Alligator_sinensis_CCG001710.1
N
Brh_R005456
Buceros rhinoceros
Brh_R005456
N
Cmyd_10017455
Chelonia mydas
Cmyd_10017455
N
ENSBTAP00000000445-D1
Bos grunniens
ENSBTAP00000000445-D1
N
ENSP00000360662
Macaca fascicularis
ENSP00000360662
N
Gfo_R009593
Geospiza fortis
Gfo_R009593
N
Myotis_brandtii_ADNP_10026361
Myotis brandtii
Myotis_brandtii_ADNP_10026361
N
Ogr08135
Ophisaurus gracilis
Ogr08135
N
Pvit_03339
Pogona vitticeps
Pvit_03339
N
Tal_R004420
Tyto alba
Tal_R004420
N
adnp
Xenopus tropicalis
XB-GENE-852807
N
ADNP
Gallus gallus
ENSGALG00000007989
N
ENSAPLG00000007870
Anas platyrhynchos
ENSAPLG00000007870
N
ADNP
Bos taurus
ENSBTAG00000000340
N
ADNP
Canis familiaris
ENSCAFG00000011576
N
ADNP
Choloepus hoffmanni
ENSCHOG00000011573
N
ADNP
Callithrix jacchus
ENSCJAG00000000563
N
ADNP
Cavia porcellus
ENSCPOG00000001591
N
ENSCSAG00000015205
Chlorocebus sabaeus
ENSCSAG00000015205
N
adnpb
Danio rerio
ENSDARG00000074293
N
ENSDNOG00000001749
Dasypus novemcinctus
ENSDNOG00000001749
N
ADNP
Equus caballus
ENSECAG00000009307
N
ADNP
Erinaceus europaeus
ENSEEUG00000007786
N
ADNP
Echinops telfairi
ENSETEG00000011996
N
ENSFALG00000013032
Ficedula albicollis
ENSFALG00000013032
N
ADNP
Felis catus
ENSFCAG00000025702
N
ADNP
Homo sapiens
ENSG00000101126
N
ENSAMEG00000013360
Ailuropoda melanoleuca
ENSAMEG00000013360
N
ADNP
Gorilla gorilla
ENSGGOG00000003120
N
ENSLACG00000009474
Latimeria chalumnae
ENSLACG00000009474
N
ADNP
Loxodonta africana
ENSLAFG00000004139
N
ENSMEUG00000007857
Macropus eugenii
ENSMEUG00000007857
N
ADNP
Meleagris gallopavo
ENSMGAG00000009385
N
ENSMICG00000015956
Microcebus murinus
ENSMICG00000015956
N
ADNP
Myotis lucifugus
ENSMLUG00000000002
N
ADNP
Macaca mulatta
ENSMMUG00000002761
N
ADNP
Monodelphis domestica
ENSMODG00000016350
N
ENSMPUG00000017548
Mustela putorius furo
ENSMPUG00000017548
N
Adnp
Mus musculus
ENSMUSG00000051149
N
ENSNLEG00000006995
Nomascus leucogenys
ENSNLEG00000006995
N
ADNP
Ornithorhynchus anatinus
ENSOANG00000008675
N
ENSOARG00000013868
Ovis aries
ENSOARG00000013868
N