CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PHUM316810
(
Pediculus humanus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
PHUM316810
T168496_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BGIBMGA012843
M01907_2.00
Bombyx mori
NNCGCGTANVNN
NNBNTACGCGNN
PBM
Weirauch et al.(2014)
pTH9239
0.872
0.872
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.766
0.766
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.766
0.766
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.702
0.702
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.702
0.702
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PHUM316810-PA
CxxC
470
516
GPRRRRTRCKKCEACQRNDCGECSFCLDMVKFGGPGRAKQTCVMRQC
Links
Other
CxxC
family TFs
Other
Pediculus humanus
TFs
160 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA036955
Oryza indica
BGIOSGA036955
N
LPERR12G08370
Leersia perrieri
LPERR12G08370
N
OBART11G02350
Oryza barthii
OBART11G02350
N
OGLUM11G02060
Oryza glumaepatula
OGLUM11G02060
N
OMERI12G00860
Oryza meridionalis
OMERI12G00860
N
OMERI12G01050
Oryza meridionalis
OMERI12G01050
N
OPUNC11G02200
Oryza punctata
OPUNC11G02200
N
ORUFI12G02480
Oryza rufipogon
ORUFI12G02480
N
OS12G0135850
Oryza sativa
OS12G0135850
N