CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10001830
(
Chelonia mydas
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02008 (zf-CXXC)
IPR002857
Cmyd_10001830
T168580_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BAD93120.1_CONSTRUCT
M01919_2.00
PBM CONSTRUCTS
NNNBCGN
NCGVNNN
PBM
Weirauch et al.(2014)
pTH7032
0.979
0.979
CXXC1
M10428_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CGBP_01
0.979
0.979
CXXC1
M10429_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CGBP_02
0.979
0.979
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10001830
CxxC
356
404
QQIKRSARMCGECEACRRTEDCGQCDFCRDMKKFGGPNKIRQKCRLRQC
Links
Other
CxxC
family TFs
Other
Chelonia mydas
TFs
79 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CTHT_0041740
Chaetomium thermophilum
CTHT_0041740
I
GSTUM_00005043001
Tuber melanosporum
GSTUM_00005043001
I
MPH_04494
Macrophomina phaseolina
MPH_04494
I
PMAA_011030
Talaromyces marneffei
PMAA_011030
I
PV09_00512
Verruconis gallopava
PV09_00512
I
TSTA_006150
Talaromyces stipitatus
TSTA_006150
I
PMAA_011030
Penicillium marneffei
PMAA_011030
I
OIDMADRAFT_29853
Oidiodendron maius
OIDMADRAFT_29853
N