CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI01068300
(
Haemonchus contortus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02008 (zf-CXXC)
IPR002857
HCOI01068300
T168804_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Y75B8A.6
M00652_2.00
Caenorhabditis elegans
NHKCGGD
HCCGMDN
PBM
Narasimhan et al.(2015)
pTH10798
0.871
0.871
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI01068300.t1
CxxC
38
84
SSMNRSQRCGVCRGCQCKPCGQCTYCQDSPQFGGPGVKKQSCIERRC
HCOI01068300.t1
CxxC
98
143
TFKARVGCNQCEDCRMPDCQICLVCLDKRFFDNRYMTGAMCAKKRC
HCOI01068300.t2
CxxC
38
84
SSMNRSQRCGVCRGCQCKPCGQCTYCQDSPQFGGPGVKKQSCIERRC
HCOI01068300.t2
CxxC
98
143
TFKARVGCNQCEDCRMPDCQICLVCLDKRFFDNRYMTGAMCAKKRC
HCOI01068300.t3
CxxC
38
84
SSMNRSQRCGVCRGCQCKPCGQCTYCQDSPQFGGPGVKKQSCIERRC
HCOI01068300.t3
CxxC
98
143
TFKARVGCNQCEDCRMPDCQICLVCLDKRFFDNRYMTGAMCAKKRC
Links
Other
CxxC
family TFs
Other
Haemonchus contortus
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Y75B8A.6
Caenorhabditis elegans
WBGene00013543
D
0.871
nOo.2.0.1.g00486
Onchocerca ochengi
nOo.2.0.1.g00486
I
1.000
L596_g2693
Steinernema carpocapsae
L596_g2693
I
0.925
L889_g11692
Steinernema feltiae
L889_g11692
I
0.935
L892_g8723
Steinernema scapterisci
L892_g8723
I
0.935
L893_g11169
Steinernema glaseri
L893_g11169
I
0.935
L898_g2249
Steinernema monticolum
L898_g2249
I
0.935
maker-nMf.1.1.scaf00003-augustus-gene-0.28
Meloidogyne floridensis
maker-nMf.1.1.scaf00003-augustus-gene-0.28
I
0.871
MhA1_Contig45.frz3.gene23
Meloidogyne hapla
MhA1_Contig45.frz3.gene23
I
0.871
nAv.1.0.1.g08193
Acanthocheilonema viteae
nAv.1.0.1.g08193
I
1.000
nDi.2.2.2.g00651
Dirofilaria immitis
nDi.2.2.2.g00651
I
1.000
NECAME_17957
Necator americanus
NECAME_17957
I
0.989
nLs.2.1.2.g02012
Litomosoides sigmodontis
nLs.2.1.2.g02012
I
0.989
HPLM_0000711501
Haemonchus placei
HPLM_0000711501
I
1.000
OFLC_0000081601
Onchocerca flexuosa
OFLC_0000081601
I
0.806
PTRK_0000092500
Parastrongyloides trichosuri
PTRK_0000092500
I
0.882
RSKR_0000225500
Rhabditophanes kr3021
RSKR_0000225500
I
0.903
scaffold299-EXSNAP2012.1
Pristionchus exspectatus
scaffold299-EXSNAP2012.1
I
0.946
SMUV_0000924801
Syphacia muris
SMUV_0000924801
I
0.935
SPAL_0001350300
Strongyloides papillosus
SPAL_0001350300
I
0.860
SSTP_0000713800
Strongyloides stercoralis
SSTP_0000713800
I
0.871
SVE_1815200
Strongyloides venezuelensis
SVE_1815200
I
0.871
TCLT_0000655501
Thelazia callipaeda
TCLT_0000655501
I
0.978
TELCIR_14928
Teladorsagia circumcincta
TELCIR_14928
I
0.731
ANCDUO_18427
Ancylostoma duodenale
ANCDUO_18427
I
0.892
Bm7134
Brugia malayi
Bm7134
I
1.000
CBN05533
Caenorhabditis brenneri
CBN05533
I
0.871
CRE24477
Caenorhabditis remanei
CRE24477
I
0.935
LOAG_00893
Loa loa
LOAG_00893
I
1.000
WBGene00245177
Onchocerca volvulus
WBGene00245177
I
1.000
Minc01117
Meloidogyne incognita
Minc01117
I
0.871
ACAC_0000147901
Angiostrongylus cantonensis
ACAC_0000147901
I
0.989
ACOC_0000995801
Angiostrongylus costaricensis
ACOC_0000995801
I
0.989
ANCCAN_26375
Ancylostoma caninum
ANCCAN_26375
I
0.989
ANCCEY_00898
Ancylostoma ceylanicum
ANCCEY_00898
I
0.989
WUBG_12123
Wuchereria bancrofti
WUBG_12123
I
1.000
ASIM_0002143001
Anisakis simplex
ASIM_0002143001
I
0.720
ASU_09163
Ascaris suum
ASU_09163
I
1.000
BTMF_0001264901
Brugia timori
BTMF_0001264901
I
0.806
BXY_0595700
Bursaphelenchus xylophilus
BXY_0595700
I
0.925
DICVIV_03386
Dictyocaulus viviparus
DICVIV_03386
I
1.000
EEL_0000525201
Elaeophora elaphi
EEL_0000525201
I
0.925
EVEC_0001194701
Enterobius vermicularis
EVEC_0001194701
I
0.935
GPLIN_001307100
Globodera pallida
GPLIN_001307100
I
0.849
HCOI02160700
Haemonchus contortus
HCOI02160700
I
1.000