CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI02160700
(
Haemonchus contortus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02008 (zf-CXXC)
IPR002857
HCOI02160700
T168806_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Y75B8A.6
M00652_2.00
Caenorhabditis elegans
NHKCGGD
HCCGMDN
PBM
Narasimhan et al.(2015)
pTH10798
0.871
0.871
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI02160700.t1
CxxC
38
84
SSMNRSQRCGVCRGCQCKPCGQCTYCQDSPQFGGPGVKKQSCIERRC
HCOI02160700.t1
CxxC
98
143
TFKARVGCNQCEDCRMPDCQICLVCLDKRFFDNRYMTGAMCAKKRC
HCOI02160700.t2
CxxC
38
84
SSMNRSQRCGVCRGCQCKPCGQCTYCQDSPQFGGPGVKKQSCIERRC
HCOI02160700.t2
CxxC
98
143
TFKARVGCNQCEDCRMPDCQICLVCLDKRFFDNRYMTGAMCAKKRC
HCOI02160700.t3
CxxC
38
84
SSMNRSQRCGVCRGCQCKPCGQCTYCQDSPQFGGPGVKKQSCIERRC
HCOI02160700.t3
CxxC
98
143
TFKARVGCNQCEDCRMPDCQICLVCLDKRFFDNRYMTGAMCAKKRC
Links
Other
CxxC
family TFs
Other
Haemonchus contortus
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TVAG_077130
Trichomonas vaginalis
TVAG_077130
I
EBI_26398
Enterocytozoon bieneusi
EBI_26398
N
EHEL_060180
Encephalitozoon hellem
EHEL_060180
N
Eint_060160
Encephalitozoon intestinalis
Eint_060160
N
EROM_060170
Encephalitozoon romaleae
EROM_060170
N
M896_060270
Ordospora colligata
M896_060270
N
NAPIS_ORF00436
Nosema apis
NAPIS_ORF00436
N
NBO_7g0014
Nosema bombycis
NBO_7g0014
N
NBO_943g0002
Nosema bombycis
NBO_943g0002
N
NCER_100843
Nosema ceranae
NCER_100843
N
SLOPH_1959
Spraguea lophii
SLOPH_1959
N
VCUG_01723
Vavraia culicis
VCUG_01723
N
VICG_01349
Vittaforma corneae
VICG_01349
N