CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L898_g22776
(
Steinernema monticolum
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
L898_g22776
T169886_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmd-6
M00655_2.00
Caenorhabditis elegans
NNWWDTDNNN
NNNHAHWWNN
PBM
Narasimhan et al.(2015)
pTH10816
0.879
0.739
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L898_g22776.t1
DM
109
154
RVLYCRKCEGHGVQAILKGHAPTCPYNLCNCKSCEKLMTKRLHSFN
Links
Other
DM
family TFs
Other
Steinernema monticolum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc05084
Meloidogyne incognita
Minc05084
N
Minc05916
Meloidogyne incognita
Minc05916
N
augustus_masked-nMf.1.1.scaf05877-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf05877-processed-gene-0.0
N