CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr1G00430_001
(
Musa acuminata
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
GSMUA_Achr1G00430_001
T173165_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TFDP1
M08108_2.00
Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA1122.1
0.794
0.794
TFDP1
M09035_2.00
Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB
Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C
0.794
0.794
dpl-1
M09525_2.00
Caenorhabditis elegans
GCGCGYHW
WDRCGCGC
Misc
Heinz et al.(2010)
cElegans-Adult_modEncode
0.721
0.721
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr1P00430_001
E2F
96
176
SGRGLRQFSMKVCEKVESKGRTTYNEVADELVTEFTDPNNNPGSQDQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKG
Links
Other
E2F
family TFs
Other
Musa acuminata
TFs
549 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ATMYB13
Arabidopsis thaliana
AT1G06180
D
ATMYB63
Arabidopsis thaliana
AT1G79180
D
AMTR_s00032p00057800
Amborella trichopoda
AMTR_s00032p00057800
I
BGIOSGA031688
Oryza indica
BGIOSGA031688
I
Bo1g051220
Brassica oleracea
Bo1g051220
I
Bo6g081140
Brassica oleracea
Bo6g081140
I
Bra003619
Brassica rapa
Bra003619
I
Bra026281
Brassica rapa
Bra026281
I
ATMYB13
Arabidopsis lyrata
fgenesh2_kg.1__590__AT1G06180.1
I
ATMYB63
Arabidopsis lyrata
fgenesh2_kg.2__2216__AT1G79180.1
I
GLYMA01G06192
Glycine max
GLYMA01G06192
I
GLYMA02G12242
Glycine max
GLYMA02G12242
I
GLYMA06G45554
Glycine max
GLYMA06G45554
I
GLYMA06G45570
Glycine max
GLYMA06G45570
I
GLYMA10G32410
Glycine max
GLYMA10G32410
I
GLYMA12G11330
Glycine max
GLYMA12G11330
I
GLYMA12G32530
Glycine max
GLYMA12G32530
I
GLYMA13G37903
Glycine max
GLYMA13G37903
I
GLYMA20G35180
Glycine max
GLYMA20G35180
I
GSMUA_Achr11G00410_001
Musa acuminata
GSMUA_Achr11G00410_001
I
GSMUA_Achr11G22820_001
Musa acuminata
GSMUA_Achr11G22820_001
I
GSMUA_Achr4G18180_001
Musa acuminata
GSMUA_Achr4G18180_001
I
GSMUA_Achr4G21910_001
Musa acuminata
GSMUA_Achr4G21910_001
I
GSMUA_Achr4G28850_001
Musa acuminata
GSMUA_Achr4G28850_001
I
GSMUA_Achr5G03920_001
Musa acuminata
GSMUA_Achr5G03920_001
I
GSMUA_Achr5G14600_001
Musa acuminata
GSMUA_Achr5G14600_001
I
OB0039G10010
Oryza brachyantha
OB0039G10010
I
ONIVA04G17140
Oryza nivara
ONIVA04G17140
I
ORGLA04G0158700
Oryza glaberrima
ORGLA04G0158700
I
ORUFI04G20280
Oryza rufipogon
ORUFI04G20280
I
ORUFI10G14060
Oryza rufipogon
ORUFI10G14060
I
OS10G0478300
Oryza sativa
OS10G0478300
I
PGSC0003DMG400016292
Solanum tuberosum
PGSC0003DMG400016292
I
PGSC0003DMG401026177
Solanum tuberosum
PGSC0003DMG401026177
I
PGSC0003DMG402026177
Solanum tuberosum
PGSC0003DMG402026177
I
POPTR_0004s02570
Populus trichocarpa
POPTR_0004s02570
I
POPTR_0008s16660
Populus trichocarpa
POPTR_0008s16660
I
POPTR_0013s14560
Populus trichocarpa
POPTR_0013s14560
I
POPTR_0019s14120
Populus trichocarpa
POPTR_0019s14120
I
Si010814m.g
Setaria italica
Si010814m.g
I
Solyc06g053610.2
Solanum lycopersicum
Solyc06g053610.2
I
Solyc07g053230.2
Solanum lycopersicum
Solyc07g053230.2
I
Solyc07g053240.2
Solanum lycopersicum
Solyc07g053240.2
I
Solyc07g054980.1
Solanum lycopersicum
Solyc07g054980.1
I
TCM_004046
Theobroma cacao
TCM_004046
I
TCM_007865
Theobroma cacao
TCM_007865
I
TCM_007868
Theobroma cacao
TCM_007868
I
TCM_020889
Theobroma cacao
TCM_020889
I
TCM_026197
Theobroma cacao
TCM_026197
I
TCM_030020
Theobroma cacao
TCM_030020
I
VIT_05s0049g01010
Vitis vinifera
VIT_05s0049g01010
I
VIT_05s0049g01020
Vitis vinifera
VIT_05s0049g01020
I
VIT_07s0005g03340
Vitis vinifera
VIT_07s0005g03340
I
VIT_12s0134g00480
Vitis vinifera
VIT_12s0134g00480
I
VIT_12s0134g00490
Vitis vinifera
VIT_12s0134g00490
I
Ca_12130
Cicer arietinum
Ca_12130
I
Cla006077
Citrullus lanatus
Cla006077
I
Cla021845
Citrullus lanatus
Cla021845
I
cassava25784.m1
Manihot esculenta
cassava25784.m1
I
cassava47180.m1
Manihot esculenta
cassava47180.m1
I
cassava6764.valid.m1
Manihot esculenta
cassava6764.valid.m1
I
Cucsa.053600
Cucumis sativus
Cucsa.053600
I
Aquca_034_00364
Aquilegia coerulea
Aquca_034_00364
I
Bostr.20129s0353
Boechera stricta
Bostr.20129s0353
I
Bostr.24513s0107
Boechera stricta
Bostr.24513s0107
I
Cagra.7286s0009
Capsella grandiflora
Cagra.7286s0009
I
Carubv10023905m.g
Capsella rubella
Carubv10023905m.g
I
Ciclev10005629m.g
Citrus clementina
Ciclev10005629m.g
I
Ciclev10016303m.g
Citrus clementina
Ciclev10016303m.g
I
Ciclev10017435m.g
Citrus clementina
Ciclev10017435m.g
I
Ciclev10017677m.g
Citrus clementina
Ciclev10017677m.g
I
Ciclev10017679m.g
Citrus clementina
Ciclev10017679m.g
I
Ciclev10018311m.g
Citrus clementina
Ciclev10018311m.g
I
Ciclev10021699m.g
Citrus clementina
Ciclev10021699m.g
I
Ciclev10022057m.g
Citrus clementina
Ciclev10022057m.g
I
Eucgr.A01766
Eucalyptus grandis
Eucgr.A01766
I
Eucgr.A01767
Eucalyptus grandis
Eucgr.A01767
I
Eucgr.D00040
Eucalyptus grandis
Eucgr.D00040
I
Eucgr.D00042
Eucalyptus grandis
Eucgr.D00042
I
Eucgr.D00751
Eucalyptus grandis
Eucgr.D00751
I
Eucgr.H00158
Eucalyptus grandis
Eucgr.H00158
I
Eucgr.H03057
Eucalyptus grandis
Eucgr.H03057
I
Eucgr.K03262
Eucalyptus grandis
Eucgr.K03262
I
evm.TU.supercontig_44.60
Carica papaya
evm.TU.supercontig_44.60
I
evm.TU.supercontig_50.19
Carica papaya
evm.TU.supercontig_50.19
I
Gorai.001G177100
Gossypium raimondii
Gorai.001G177100
I
Gorai.002G016800
Gossypium raimondii
Gorai.002G016800
I
Gorai.005G206300
Gossypium raimondii
Gorai.005G206300
I
Gorai.007G146200
Gossypium raimondii
Gorai.007G146200
I
Gorai.008G151100
Gossypium raimondii
Gorai.008G151100
I
Gorai.011G173900
Gossypium raimondii
Gorai.011G173900
I
Gorai.012G132400
Gossypium raimondii
Gorai.012G132400
I
Gorai.013G071600
Gossypium raimondii
Gorai.013G071600
I
Gorai.013G072900
Gossypium raimondii
Gorai.013G072900
I
Gorai.013G143200
Gossypium raimondii
Gorai.013G143200
I
Lus10022021.g
Linum usitatissimum
Lus10022021.g
I
Lus10039734.g
Linum usitatissimum
Lus10039734.g
I
Lus10039735.g
Linum usitatissimum
Lus10039735.g
I
Lus10042561.g
Linum usitatissimum
Lus10042561.g
I
MDP0000131822
Malus domestica
MDP0000131822
I
MDP0000145050
Malus domestica
MDP0000145050
I
MDP0000289283
Malus domestica
MDP0000289283
I
orange1.1g024484m.g
Citrus sinensis
orange1.1g024484m.g
I
orange1.1g024492m.g
Citrus sinensis
orange1.1g024492m.g
I
orange1.1g024860m.g
Citrus sinensis
orange1.1g024860m.g
I
orange1.1g042846m.g
Citrus sinensis
orange1.1g042846m.g
I
Pavir.Gb00650
Panicum virgatum
Pavir.Gb00650
I
SapurV1A.0048s0210
Salix purpurea
SapurV1A.0048s0210
I
SapurV1A.0417s0130
Salix purpurea
SapurV1A.0417s0130
I
Thhalv10008531m.g
Eutrema salsugineum
Thhalv10008531m.g
I
Thhalv10018933m.g
Eutrema salsugineum
Thhalv10018933m.g
I
Thhalv10027463m.g
Eutrema salsugineum
Thhalv10027463m.g
I
PK03488.1
Cannabis sativa
PK03488.1
I
PK08038.1
Cannabis sativa
PK08038.1
I
PK20358.1
Cannabis sativa
PK20358.1
I
PK29337.1
Cannabis sativa
PK29337.1
I
PDK_20s1320951g001
Phoenix dactylifera
PDK_20s1320951g001
I
GLYMA06G45520
Glycine max
GLYMA06G45520
N
GLYMA06G45540
Glycine max
GLYMA06G45540
N
GLYMA06G45547
Glycine max
GLYMA06G45547
N
GLYMA12G11340
Glycine max
GLYMA12G11340
N
GLYMA12G11390
Glycine max
GLYMA12G11390
N
GLYMA12G11490
Glycine max
GLYMA12G11490
N
GLYMA12G32541
Glycine max
GLYMA12G32541
N
MTR_0008s0390
Medicago truncatula
MTR_0008s0390
N
MTR_0008s0470
Medicago truncatula
MTR_0008s0470
N
MTR_0251s0050
Medicago truncatula
MTR_0251s0050
N
MTR_2g089420
Medicago truncatula
MTR_2g089420
N
MTR_2g089450
Medicago truncatula
MTR_2g089450
N
PGSC0003DMG400013752
Solanum tuberosum
PGSC0003DMG400013752
N
PGSC0003DMG400015087
Solanum tuberosum
PGSC0003DMG400015087
N
PGSC0003DMG400026176
Solanum tuberosum
PGSC0003DMG400026176
N
POPTR_0011s04000
Populus trichocarpa
POPTR_0011s04000
N
POPTR_0011s04010
Populus trichocarpa
POPTR_0011s04010
N
POPTR_0011s04020
Populus trichocarpa
POPTR_0011s04020
N
POPTR_0019s14130
Populus trichocarpa
POPTR_0019s14130
N
POPTR_0019s14140
Populus trichocarpa
POPTR_0019s14140
N
PRUPE_ppa015081mg
Prunus persica
PRUPE_ppa015081mg
N
PRUPE_ppa026553mg
Prunus persica
PRUPE_ppa026553mg
N
Solyc12g005640.1
Solanum lycopersicum
Solyc12g005640.1
N
TCM_033015
Theobroma cacao
TCM_033015
N
TCM_033016
Theobroma cacao
TCM_033016
N
VIT_00s0203g00170
Vitis vinifera
VIT_00s0203g00170
N
Ca_22597
Cicer arietinum
Ca_22597
N
Pm009880
Prunus mume
Pm009880
N
Pm015302
Prunus mume
Pm015302
N
29933.m001454
Ricinus communis
29933.m001454
N
cassava26894.m1
Manihot esculenta
cassava26894.m1
N
cassava5261.m1
Manihot esculenta
cassava5261.m1
N
cassava5263.m1
Manihot esculenta
cassava5263.m1
N
Aquca_030_00245
Aquilegia coerulea
Aquca_030_00245
N
Eucgr.D00037
Eucalyptus grandis
Eucgr.D00037
N
Eucgr.D00050
Eucalyptus grandis
Eucgr.D00050
N
evm.TU.supercontig_27.156
Carica papaya
evm.TU.supercontig_27.156
N
evm.TU.supercontig_34.62
Carica papaya
evm.TU.supercontig_34.62
N
gene01998-v1.0-hybrid
Fragaria vesca
gene01998-v1.0-hybrid
N
gene30736-v1.0-hybrid
Fragaria vesca
gene30736-v1.0-hybrid
N
Gorai.005G206800
Gossypium raimondii
Gorai.005G206800
N
Gorai.010G148300
Gossypium raimondii
Gorai.010G148300
N
Gorai.011G021300
Gossypium raimondii
Gorai.011G021300
N
Gorai.013G143000
Gossypium raimondii
Gorai.013G143000
N
Gorai.013G143100
Gossypium raimondii
Gorai.013G143100
N
Lus10018545.g
Linum usitatissimum
Lus10018545.g
N
Lus10018546.g
Linum usitatissimum
Lus10018546.g
N
Lus10018547.g
Linum usitatissimum
Lus10018547.g
N
Lus10031607.g
Linum usitatissimum
Lus10031607.g
N
Lus10033738.g
Linum usitatissimum
Lus10033738.g
N
Lus10039771.g
Linum usitatissimum
Lus10039771.g
N
Lus10039772.g
Linum usitatissimum
Lus10039772.g
N
MDP0000407613
Malus domestica
MDP0000407613
N
orange1.1g037956m.g
Citrus sinensis
orange1.1g037956m.g
N
SapurV1A.0028s0640
Salix purpurea
SapurV1A.0028s0640
N
SapurV1A.0048s0160
Salix purpurea
SapurV1A.0048s0160
N
PK24260.1
Cannabis sativa
PK24260.1
N
chr3.LjT47O18.40.nc
Lotus japonicus
chr3.LjT47O18.40.nc
N
chr3.LjT47O18.60.nc
Lotus japonicus
chr3.LjT47O18.60.nc
N
chr3.LjT47O18.70.nc
Lotus japonicus
chr3.LjT47O18.70.nc
N