OLONG_026287 (Oryza longistaminata)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 OLONG_026287 T173336_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.38.2.1
M01968_2.00 		Physcomitrella patens
NSGCGCBHHN
NDDVGCGCSN		 PBM
Weirauch et al.(2014)
pTH5707 		0.463 0.463
estExt_gwp_gw1.C_220046
M01225_2.00 		Physcomitrella patens
VGCGCBHHNN
NNDDVGCGCB		 PBM
Lambert et al.(2019)
pTH9809 		0.463 0.463
E2F4
M02961_2.00 		Homo sapiens
AATGGCGCCAAA
TTTGGCGCCATT		 SELEX
Jolma et al.(2013)
E2F4_1 		0.433 0.433
E2F4
M02962_2.00 		Homo sapiens
TTTGGCGCCAAA
TTTGGCGCCAAA		 SELEX
Jolma et al.(2013)
E2F4_2 		0.433 0.433
E2F4
M04707_2.00 		Homo sapiens
NWWKGGCGCCAAAW
WTTTGGCGCCMWWN		 SELEX
Yin et al.(2017)
E2F4_eDBD_HT-SELEX 		0.433 0.433
E2F4
M08109_2.00 		Homo sapiens
NSGCGGGARVN
NBYTCCCGCSN		 ChIP-seq
Mathelier et al.(2014)
MA0470.1 		0.433 0.433
E2F4
M07942_2.00 		Homo sapiens
SGCGSGARDNNBNVN
NBNVNNHYTCSCGCS		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F4_UCD 		0.433 0.433
E2F4
M07943_2.00 		Homo sapiens
SGCGGGARDNNBVVN
NBBVNNHYTCCCGCS		 ChIP-seq
Gerstein et al.(2012)
K562b_E2F4_UCD 		0.433 0.433
E2F4
M09036_2.00 		Homo sapiens
VDRGGCGGGRVND
HNBYCCCGCCYHB		 Misc
Kulakovskiy et al.(2013)
E2F4_HUMAN.H11MO.0.A 		0.433 0.433
E2f4
M09037_2.00 		Mus musculus
NRDDGGCGGGRMNN
NNKYCCCGCCHHYN		 Misc
Kulakovskiy et al.(2013)
E2F4_MOUSE.H11MO.0.A 		0.433 0.433
E2F4
M09524_2.00 		Homo sapiens
VGCGSGAADH
DHTTCSCGCB		 Misc
Heinz et al.(2010)
K562-E2F4_GSE31477 		0.433 0.433
E2F4
M10457_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F4_05 		0.433 0.433
E2F4
M10458_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F4_Q3 		0.433 0.433
E2F4
M10459_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F4_Q6 		0.433 0.433
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_026287-R1 E2F 21 87

Links

Other E2F family TFs
Other Oryza longistaminata TFs

246 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
E2F4 Homo sapiens ENSG00000205250 D 0.433
E2f4 Mus musculus ENSMUSG00000014859 D 0.433
e_gw1.38.2.1 Physcomitrella patens e_gw1.38.2.1 D 0.463
estExt_gwp_gw1.C_220046 Physcomitrella patens estExt_gwp_gw1.C_220046 D 0.463
AC214168.3_FG001 Zea mays AC214168.3_FG001 I 0.433
AC233850.1_FG005 Zea mays AC233850.1_FG005 I 0.448
ACEP12483 Atta cephalotes ACEP12483 I 0.433
AMTR_s00030p00231260 Amborella trichopoda AMTR_s00030p00231260 I 0.463
AMTR_s00220p00023690 Amborella trichopoda AMTR_s00220p00023690 I 0.463
E2FB Arabidopsis thaliana AT5G22220 I 0.433
BGIBMGA006899 Bombyx mori BGIBMGA006899 I 0.448
BGIOSGA006304 Oryza indica BGIOSGA006304 I 0.463
BGIOSGA015126 Oryza indica BGIOSGA015126 I 0.522
BGIOSGA036595 Oryza indica BGIOSGA036595 I 0.478
Bo3g015790 Brassica oleracea Bo3g015790 I 0.433
Bo9g106030 Brassica oleracea Bo9g106030 I 0.433
Bra002398 Brassica rapa Bra002398 I 0.433
Bra006615 Brassica rapa Bra006615 I 0.433
BRADI3G45130 Brachypodium distachyon BRADI3G45130 I 0.463
BRADI4G42050 Brachypodium distachyon BRADI4G42050 I 0.478
CHLREDRAFT_206364 Chlamydomonas reinhardtii CHLREDRAFT_206364 I 0.448
DAPPUDRAFT_303685 Daphnia pulex DAPPUDRAFT_303685 I 0.433
DAPPUDRAFT_71618 Daphnia pulex DAPPUDRAFT_71618 I 0.433
E2F4 Anolis carolinensis ENSACAG00000028484 I 0.433
ENSAMEG00000017275 Ailuropoda melanoleuca ENSAMEG00000017275 I 0.433
E2F4 Bos taurus ENSBTAG00000012063 I 0.433
E2F4 Canis familiaris ENSCAFG00000020375 I 0.433
E2F4 Callithrix jacchus ENSCJAG00000016403 I 0.433
E2F4 Cavia porcellus ENSCPOG00000010845 I 0.433
ENSCSAG00000003814 Chlorocebus sabaeus ENSCSAG00000003814 I 0.433
e2f4 Danio rerio ENSDARG00000101578 I 0.433
E2F4 Dasypus novemcinctus ENSDNOG00000041139 I 0.433
ENSDORG00000015131 Dipodomys ordii ENSDORG00000015131 I 0.433
E2F4 Equus caballus ENSECAG00000015595 I 0.433
ENSFALG00000007077 Ficedula albicollis ENSFALG00000007077 I 0.433
e2f4 Gasterosteus aculeatus ENSGACG00000013827 I 0.433
E2F4 Gallus gallus ENSGALG00000001722 I 0.433
E2F4 Gorilla gorilla ENSGGOG00000011924 I 0.433
ENSGMOG00000012711 Gadus morhua ENSGMOG00000012711 I 0.433
E2F4 Loxodonta africana ENSLAFG00000026216 I 0.433
ENSLOCG00000006277 Lepisosteus oculatus ENSLOCG00000006277 I 0.433
E2F4 Meleagris gallopavo ENSMGAG00000002517 I 0.433
E2F4 Myotis lucifugus ENSMLUG00000023162 I 0.433
E2F4 Macaca mulatta ENSMMUG00000020258 I 0.433
E2F4 Monodelphis domestica ENSMODG00000006150 I 0.433
ENSMPUG00000005564 Mustela putorius furo ENSMPUG00000005564 I 0.433
ENSNLEG00000004342 Nomascus leucogenys ENSNLEG00000004342 I 0.433
E2F4 Otolemur garnettii ENSOGAG00000000010 I 0.433
ENSONIG00000010271 Oreochromis niloticus ENSONIG00000010271 I 0.433
E2F4 Ochotona princeps ENSOPRG00000015165 I 0.433
e2f4 Oryzias latipes ENSORLG00000015705 I 0.433
ENSPANG00000016794 Papio anubis ENSPANG00000016794 I 0.433
E2F4 Procavia capensis ENSPCAG00000013266 I 0.433
ENSPFOG00000006707 Poecilia formosa ENSPFOG00000006707 I 0.433
ENSPPYG00000007445 Pongo abelii ENSPPYG00000007445 I 0.433
E2F4 Pan troglodytes ENSPTRG00000031180 I 0.433
E2F4 Pteropus vampyrus ENSPVAG00000005274 I 0.433
E2f4 Rattus norvegicus ENSRNOG00000015708 I 0.433
E2F4 Sus scrofa ENSSSCG00000002787 I 0.433
ENSSTOG00000016434 Ictidomys tridecemlineatus ENSSTOG00000016434 I 0.433
E2F4 Taeniopygia guttata ENSTGUG00000005417 I 0.433
e2f4 Tetraodon nigroviridis ENSTNIG00000005170 I 0.433
e2f4 Tetraodon nigroviridis ENSTNIG00000008814 I 0.433
e2f5 Takifugu rubripes ENSTRUG00000002354 I 0.433
e2f4 Takifugu rubripes ENSTRUG00000009757 I 0.433
ENSTSYG00000007645 Tarsius syrichta ENSTSYG00000007645 I 0.433
ENSXMAG00000001974 Xiphophorus maculatus ENSXMAG00000001974 I 0.433
F775_07838 Aegilops tauschii F775_07838 I 0.463
F775_13418 Aegilops tauschii F775_13418 I 0.478
fgenesh1_pg.9__218 Bigelowiella natans fgenesh1_pg.9__218 I 0.448
E2F1 Arabidopsis lyrata fgenesh2_kg.6__2206__AT5G22220.2 I 0.433
GB53826 Apis mellifera GB53826 I 0.433
GLYMA02G35850 Glycine max GLYMA02G35850 I 0.448
GLYMA10G09410 Glycine max GLYMA10G09410 I 0.463
GLYMA11G18401 Glycine max GLYMA11G18401 I 0.448
GLYMA12G09860 Glycine max GLYMA12G09860 I 0.448
GRMZM2G041701 Zea mays GRMZM2G041701 I 0.448
GRMZM2G052515 Zea mays GRMZM2G052515 I 0.478
GRMZM2G333591 Zea mays GRMZM2G333591 I 0.463
GRMZM5G829408 Zea mays GRMZM5G829408 I 0.463
GSMUA_Achr2G20420_001 Musa acuminata GSMUA_Achr2G20420_001 I 0.463
GSMUA_Achr4G17950_001 Musa acuminata GSMUA_Achr4G17950_001 I 0.433
GSMUA_Achr6G07100_001 Musa acuminata GSMUA_Achr6G07100_001 I 0.463
GSMUA_Achr6G18220_001 Musa acuminata GSMUA_Achr6G18220_001 I 0.433
L798_07726 Zootermopsis nevadensis L798_07726 I 0.433
LotgiG127203 Lottia gigantea LotgiG127203 I 0.433
LPERR04G08900 Leersia perrieri LPERR04G08900 I 0.522
LPERR12G03370 Leersia perrieri LPERR12G03370 I 0.478
MLOC_11415 Hordeum vulgare MLOC_11415 I 0.478
MLOC_70470 Hordeum vulgare MLOC_70470 I 0.463
MTR_4g052000 Medicago truncatula MTR_4g052000 I 0.463
NEMVEDRAFT_v1g235633 Nematostella vectensis NEMVEDRAFT_v1g235633 I 0.433
NEMVEDRAFT_v1g245401 Nematostella vectensis NEMVEDRAFT_v1g245401 I 0.433
NV25797 Nasonia vitripennis NV25797 I 0.433
OB02G27210 Oryza brachyantha OB02G27210 I 0.463
OB12G13530 Oryza brachyantha OB12G13530 I 0.478
OBART02G19430 Oryza barthii OBART02G19430 I 0.463
OBART04G12180 Oryza barthii OBART04G12180 I 0.552
OBART12G03570 Oryza barthii OBART12G03570 I 0.478
OGLUM02G19730 Oryza glumaepatula OGLUM02G19730 I 0.463
OGLUM04G11850 Oryza glumaepatula OGLUM04G11850 I 0.552
OGLUM12G04270 Oryza glumaepatula OGLUM12G04270 I 0.478
OLONG_000194 Oryza longistaminata OLONG_000194 I 0.478
OLONG_023990 Oryza longistaminata OLONG_023990 I 0.463
OMERI02G19320 Oryza meridionalis OMERI02G19320 I 0.463
OMERI04G10740 Oryza meridionalis OMERI04G10740 I 0.522
OMERI12G01820 Oryza meridionalis OMERI12G01820 I 0.478
ONIVA02G21500 Oryza nivara ONIVA02G21500 I 0.463
ONIVA04G10110 Oryza nivara ONIVA04G10110 I 0.522
ONIVA12G03230 Oryza nivara ONIVA12G03230 I 0.478
OPUNC02G17370 Oryza punctata OPUNC02G17370 I 0.463
OPUNC04G10160 Oryza punctata OPUNC04G10160 I 0.522
OPUNC12G03430 Oryza punctata OPUNC12G03430 I 0.478
ORGLA02G0166600 Oryza glaberrima ORGLA02G0166600 I 0.463
ORGLA04G0091500 Oryza glaberrima ORGLA04G0091500 I 0.522
ORGLA12G0034600 Oryza glaberrima ORGLA12G0034600 I 0.478
ORUFI02G20490 Oryza rufipogon ORUFI02G20490 I 0.463
ORUFI04G13340 Oryza rufipogon ORUFI04G13340 I 0.522
ORUFI12G04170 Oryza rufipogon ORUFI12G04170 I 0.478
OS02G0537500 Oryza sativa OS02G0537500 I 0.463
OS04G0416100 Oryza sativa OS04G0416100 I 0.522
OS12G0158800 Oryza sativa OS12G0158800 I 0.478
PGSC0003DMG400016418 Solanum tuberosum PGSC0003DMG400016418 I 0.448
PGSC0003DMG400019629 Solanum tuberosum PGSC0003DMG400019629 I 0.448
PGSC0003DMG402005932 Solanum tuberosum PGSC0003DMG402005932 I 0.433
POPTR_0004s21100 Populus trichocarpa POPTR_0004s21100 I 0.448
POPTR_0006s22150 Populus trichocarpa POPTR_0006s22150 I 0.463
POPTR_0009s16350 Populus trichocarpa POPTR_0009s16350 I 0.448
POPTR_0016s07310 Populus trichocarpa POPTR_0016s07310 I 0.433
PRUPE_ppa005262mg Prunus persica PRUPE_ppa005262mg I 0.463
PRUPE_ppa014783mg Prunus persica PRUPE_ppa014783mg I 0.463
Sb04g021970 Sorghum bicolor Sb04g021970 I 0.448
Sb08g003670 Sorghum bicolor Sb08g003670 I 0.478
SELMODRAFT_136738 Selaginella moellendorffii SELMODRAFT_136738 I 0.463
SELMODRAFT_137588 Selaginella moellendorffii SELMODRAFT_137588 I 0.463
SELMODRAFT_229421 Selaginella moellendorffii SELMODRAFT_229421 I 0.478
SELMODRAFT_445661 Selaginella moellendorffii SELMODRAFT_445661 I 0.478
Si010044m.g Setaria italica Si010044m.g I 0.478
Si017108m.g Setaria italica Si017108m.g I 0.463
SINV22036 Solenopsis invicta SINV22036 I 0.433
Solyc01g007760.2 Solanum lycopersicum Solyc01g007760.2 I 0.448
Solyc11g068800.1 Solanum lycopersicum Solyc11g068800.1 I 0.448
SPU_028827 Strongylocentrotus purpuratus SPU_028827 I 0.433
TC011687 Tribolium castaneum TC011687 I 0.448
TCM_022853 Theobroma cacao TCM_022853 I 0.448
TCM_041291 Theobroma cacao TCM_041291 I 0.448
Thaps269254 Thalassiosira pseudonana Thaps269254 I 0.433
Traes_2AL_8EC530273 Triticum aestivum Traes_2AL_8EC530273 I 0.448
Traes_2BL_1E7B7A8CA Triticum aestivum Traes_2BL_1E7B7A8CA I 0.463
Traes_2DL_BD8048C15 Triticum aestivum Traes_2DL_BD8048C15 I 0.463
Traes_5AL_7FFD17EDE Triticum aestivum Traes_5AL_7FFD17EDE I 0.478
Traes_5BL_9F73E599F Triticum aestivum Traes_5BL_9F73E599F I 0.478
Traes_5DL_26C867084 Triticum aestivum Traes_5DL_26C867084 I 0.478
Traes_6AS_9596E4B58 Triticum aestivum Traes_6AS_9596E4B58 I 0.463
Traes_6BL_FDC8BDE8A Triticum aestivum Traes_6BL_FDC8BDE8A I 0.463
TRIUR3_07002 Triticum urartu TRIUR3_07002 I 0.448
TRIUR3_22525 Triticum urartu TRIUR3_22525 I 0.463
TRIUR3_33184 Triticum urartu TRIUR3_33184 I 0.478
E2F1 Vitis vinifera VIT_06s0080g01110 I 0.448
E2F3 Vitis vinifera VIT_08s0007g02510 I 0.463
YQE_00215 Dendroctonus ponderosae YQE_00215 I 0.433
YQE_10638 Dendroctonus ponderosae YQE_10638 I 0.433
Ca_15178 Cicer arietinum Ca_15178 I 0.448
Cflo_07334--XP_624285.1_APIME Camponotus floridanus Cflo_07334--XP_624285.1_APIME I 0.433
Cla008768 Citrullus lanatus Cla008768 I 0.448
Cla018710 Citrullus lanatus Cla018710 I 0.433
ENSMMUP00000026667 Macaca fascicularis ENSMMUP00000026667 I 0.433
ENSP00000368686-D1 Bos grunniens ENSP00000368686-D1 I 0.433
Hsal_12430--XP_624285.1_APIME Harpegnathos saltator Hsal_12430--XP_624285.1_APIME I 0.433
Myotis_brandtii_E2f4_10015050 Myotis brandtii Myotis_brandtii_E2f4_10015050 I 0.433
Pm028019 Prunus mume Pm028019 I 0.463
Pm029349 Prunus mume Pm029349 I 0.463
Pm031036 Prunus mume Pm031036 I 0.463
Pvit_02135 Pogona vitticeps Pvit_02135 I 0.433
Pvit_14741 Pogona vitticeps Pvit_14741 I 0.433
28324.m000396 Ricinus communis 28324.m000396 I 0.463
30055.m001619 Ricinus communis 30055.m001619 I 0.448
cassava31670.valid.m1 Manihot esculenta cassava31670.valid.m1 I 0.448
cassava31671.valid.m1 Manihot esculenta cassava31671.valid.m1 I 0.448
cassava45095.m1 Manihot esculenta cassava45095.m1 I 0.448
cassava9777.m1 Manihot esculenta cassava9777.m1 I 0.463
Cucsa.083720 Cucumis sativus Cucsa.083720 I 0.433
Cucsa.185850 Cucumis sativus Cucsa.185850 I 0.448
e_gw1.10.89.1 Volvox carteri e_gw1.10.89.1 I 0.433
e_gw1.364.12.1 Physcomitrella patens e_gw1.364.12.1 I 0.448
estExt_fgenesh1_pm.C_970008 Physcomitrella patens estExt_fgenesh1_pm.C_970008 I 0.448
EuGene.0000020846 Micromonas pusilla EuGene.0000020846 I 0.433
fgenesh2_pg.scaffold_349000085 Branchiostoma floridae fgenesh2_pg.scaffold_349000085 I 0.433
fgenesh2_pm.scaffold_6000024 Branchiostoma floridae fgenesh2_pm.scaffold_6000024 I 0.433
mgf014795m Mimulus guttatus mgf014795m I 0.463
mgf018602m Mimulus guttatus mgf018602m I 0.448
Ocbimv22032617m.g Octopus bimaculoides Ocbimv22032617m.g I 0.433
Aquca_002_00087 Aquilegia coerulea Aquca_002_00087 I 0.433
Aquca_072_00025 Aquilegia coerulea Aquca_072_00025 I 0.463
Bostr.26527s0055 Boechera stricta Bostr.26527s0055 I 0.433
Cagra.5627s0006 Capsella grandiflora Cagra.5627s0006 I 0.433
Carubv10003027m.g Capsella rubella Carubv10003027m.g I 0.433
Ciclev10011632m.g Citrus clementina Ciclev10011632m.g I 0.463
Ciclev10028409m.g Citrus clementina Ciclev10028409m.g I 0.448
estExt_Genemark1.C_30279 Coccomyxa subellipsoidea C169 estExt_Genemark1.C_30279 I 0.433
Eucgr.A02602 Eucalyptus grandis Eucgr.A02602 I 0.463
Eucgr.J00539 Eucalyptus grandis Eucgr.J00539 I 0.448
evm.TU.supercontig_104.59 Carica papaya evm.TU.supercontig_104.59 I 0.463
evm.TU.supercontig_195.40 Carica papaya evm.TU.supercontig_195.40 I 0.433
gene08432-v1.0-hybrid Fragaria vesca gene08432-v1.0-hybrid I 0.448
gene15311-v1.0-hybrid Fragaria vesca gene15311-v1.0-hybrid I 0.463
Gorai.001G123900 Gossypium raimondii Gorai.001G123900 I 0.448
Gorai.002G157200 Gossypium raimondii Gorai.002G157200 I 0.448
Gorai.006G114300 Gossypium raimondii Gorai.006G114300 I 0.448
Gorai.007G366600 Gossypium raimondii Gorai.007G366600 I 0.433
Gorai.013G257100 Gossypium raimondii Gorai.013G257100 I 0.448
Lus10004217.g Linum usitatissimum Lus10004217.g I 0.463
Lus10005209.g Linum usitatissimum Lus10005209.g I 0.433
Lus10016972.g Linum usitatissimum Lus10016972.g I 0.448
Lus10021298.g Linum usitatissimum Lus10021298.g I 0.433
Lus10029421.g Linum usitatissimum Lus10029421.g I 0.463
MDP0000150467 Malus domestica MDP0000150467 I 0.448
MDP0000172879 Malus domestica MDP0000172879 I 0.448
MDP0000187830 Malus domestica MDP0000187830 I 0.463
MDP0000197904 Malus domestica MDP0000197904 I 0.448
MDP0000200630 Malus domestica MDP0000200630 I 0.448
orange1.1g012778m.g Citrus sinensis orange1.1g012778m.g I 0.448
orange1.1g015627m.g Citrus sinensis orange1.1g015627m.g I 0.463
Pavir.Ab01863 Panicum virgatum Pavir.Ab01863 I 0.448
Pavir.Ca00172 Panicum virgatum Pavir.Ca00172 I 0.478
Pavir.J28624 Panicum virgatum Pavir.J28624 I 0.478
Pavir.J35270 Panicum virgatum Pavir.J35270 I 0.433
Pavir.J35678 Panicum virgatum Pavir.J35678 I 0.433
Pavir.J38646 Panicum virgatum Pavir.J38646 I 0.448
SapurV1A.0125s0090 Salix purpurea SapurV1A.0125s0090 I 0.448
SapurV1A.0510s0180 Salix purpurea SapurV1A.0510s0180 I 0.478
SapurV1A.1401s0050 Salix purpurea SapurV1A.1401s0050 I 0.463
SapurV1A.1444s0050 Salix purpurea SapurV1A.1444s0050 I 0.463
SapurV1A.1836s0050 Salix purpurea SapurV1A.1836s0050 I 0.448
Thhalv10015650m.g Eutrema salsugineum Thhalv10015650m.g I 0.433
Contig20893.0.g82 Oxytricha trifallax Contig20893.0.g82 I 0.433
LCUP006273 Lucilia cuprina LCUP006273 I 0.433
LDEC019549 Leptinotarsa decemlineata LDEC019549 I 0.448
PK11630.1 Cannabis sativa PK11630.1 I 0.448
PK18387.1 Cannabis sativa PK18387.1 I 0.463
estExt_fgeneshCV_pg.C_30214 Chlorella vulgaris estExt_fgeneshCV_pg.C_30214 I 0.433
LjSGA_014916.1 Lotus japonicus LjSGA_014916.1 I 0.463
LjSGA_021246.1 Lotus japonicus LjSGA_021246.1 I 0.448
PDK_20s1576491g001 Phoenix dactylifera PDK_20s1576491g001 I 0.463
PDK_20s1616661g001 Phoenix dactylifera PDK_20s1616661g001 I 0.448
BGLB004502 Biomphalaria glabrata BGLB004502 I 0.433