HCOI01119100 (Haemonchus contortus)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 HCOI01119100 T174279_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GSPATT00020286001
M01965_2.00 		Paramecium tetraurelia
NNSGCGSBN
NVSCGCSNN		 PBM
Weirauch et al.(2014)
pTH5647 		0.467 0.467
efl-2
M01966_2.00 		Caenorhabditis elegans
NDBGCGSBNN
NNVSCGCVHN		 PBM
Weirauch et al.(2014)
pTH5916 		0.467 0.467
efl-2
M00662_2.00 		Caenorhabditis elegans
NSGCGSNNDN
NHNNSCGCSN		 PBM
Narasimhan et al.(2015)
pTH9173 		0.467 0.467
E2FC
M06870_2.00 		Arabidopsis thaliana
AWDDDGGCGCCAAAR
YTTTGGCGCCHHHWT		 Dap-seq
OMalley et al.(2016)
E2FC_col_a 		0.467 0.467
E2F
M01959_2.00 		Dictyostelium discoideum
NNGSGCGCSHN
NDSGCGCSCNN		 PBM
Weirauch et al.(2014)
pTH5403 		0.450 0.450
E2F4
M02961_2.00 		Homo sapiens
AATGGCGCCAAA
TTTGGCGCCATT		 SELEX
Jolma et al.(2013)
E2F4_1 		0.450 0.450
E2F4
M02962_2.00 		Homo sapiens
TTTGGCGCCAAA
TTTGGCGCCAAA		 SELEX
Jolma et al.(2013)
E2F4_2 		0.450 0.450
E2F4
M04707_2.00 		Homo sapiens
NWWKGGCGCCAAAW
WTTTGGCGCCMWWN		 SELEX
Yin et al.(2017)
E2F4_eDBD_HT-SELEX 		0.450 0.450
E2F4
M08109_2.00 		Homo sapiens
NSGCGGGARVN
NBYTCCCGCSN		 ChIP-seq
Mathelier et al.(2014)
MA0470.1 		0.450 0.450
E2F4
M07942_2.00 		Homo sapiens
SGCGSGARDNNBNVN
NBNVNNHYTCSCGCS		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F4_UCD 		0.450 0.450
E2F4
M07943_2.00 		Homo sapiens
SGCGGGARDNNBVVN
NBBVNNHYTCCCGCS		 ChIP-seq
Gerstein et al.(2012)
K562b_E2F4_UCD 		0.450 0.450
E2F4
M09036_2.00 		Homo sapiens
VDRGGCGGGRVND
HNBYCCCGCCYHB		 Misc
Kulakovskiy et al.(2013)
E2F4_HUMAN.H11MO.0.A 		0.450 0.450
E2f1
M09041_2.00 		Mus musculus
NDDGGCGGGRVN
NBYCCCGCCHHN		 Misc
Kulakovskiy et al.(2013)
E2F1_MOUSE.H11MO.0.A 		0.450 0.450
E2f4
M09037_2.00 		Mus musculus
NRDDGGCGGGRMNN
NNKYCCCGCCHHYN		 Misc
Kulakovskiy et al.(2013)
E2F4_MOUSE.H11MO.0.A 		0.450 0.450
E2F4
M09524_2.00 		Homo sapiens
VGCGSGAADH
DHTTCSCGCB		 Misc
Heinz et al.(2010)
K562-E2F4_GSE31477 		0.450 0.450
E2F4
M10457_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F4_05 		0.450 0.450
E2F4
M10458_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F4_Q3 		0.450 0.450
E2F4
M10459_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F4_Q6 		0.450 0.450
ENSACAG00000013716
M01960_2.00 		Anolis carolinensis
HNVGCGCBND
HNVGCGCBND		 PBM
Weirauch et al.(2014)
pTH9221 		0.433 0.433
e_gw1.38.2.1
M01968_2.00 		Physcomitrella patens
NSGCGCBHHN
NDDVGCGCSN		 PBM
Weirauch et al.(2014)
pTH5707 		0.433 0.433
estExt_gwp_gw1.C_220046
M01225_2.00 		Physcomitrella patens
VGCGCBHHNN
NNDDVGCGCB		 PBM
Lambert et al.(2019)
pTH9809 		0.433 0.433
E2F1
M02952_2.00 		Homo sapiens
WWDGGCGCCAAW
WTTGGCGCCHWW		 SELEX
Jolma et al.(2013)
E2F1_1 		0.433 0.433
E2F1
M02953_2.00 		Homo sapiens
WWKGGCGCCWWW
WWWGGCGCCMWW		 SELEX
Jolma et al.(2013)
E2F1_2 		0.433 0.433
E2F1
M02954_2.00 		Homo sapiens
WWWKGGCGCCMWWW
WWWKGGCGCCMWWW		 SELEX
Jolma et al.(2013)
E2F1_3 		0.433 0.433
E2F1
M02955_2.00 		Homo sapiens
AAWKGGCGCCAWTW
WAWTGGCGCCMWTT		 SELEX
Jolma et al.(2013)
E2F1_4 		0.433 0.433
E2F1
M04700_2.00 		Homo sapiens
NWWWDGGCGCCAAAWH
DWTTTGGCGCCHWWWN		 SELEX
Yin et al.(2017)
E2F1_FL_HT-SELEX 		0.433 0.433
E2FA
M06871_2.00 		Arabidopsis thaliana
NDDDGGCGCCAWWW
WWWTGGCGCCHHHN		 Dap-seq
OMalley et al.(2016)
E2FA_col_a 		0.433 0.433
E2FA
M06872_2.00 		Arabidopsis thaliana
DDWDGGCGCCAWAD
HTWTGGCGCCHWHH		 Dap-seq
OMalley et al.(2016)
E2FA_colamp_a 		0.433 0.433
E2FA
M08106_2.00 		Arabidopsis thaliana
NVGCGCCAHN
NDTGGCGCBN		 ChIP-seq
Mathelier et al.(2014)
MA1414.1 		0.433 0.433
E2F1
M07938_2.00 		Homo sapiens
VRRVNRVGCGSGMDS
SHKCSCGCBYNBYYB		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F1_UCD 		0.433 0.433
E2f
M08196_2.00 		Drosophila melanogaster
AAWWBSSCGSCAA
TTGSCGSSVWWTT		 ChIP-seq
Contrino et al.(2012)
Mf10 		0.433 0.433
E2F1
M09030_2.00 		Homo sapiens
NVNDGGCGGGARVN
NBYTCCCGCCHNBN		 Misc
Kulakovskiy et al.(2013)
E2F1_HUMAN.H11MO.0.A 		0.433 0.433
E2f5
M09042_2.00 		Mus musculus
NGCGCSAAAN
NTTTSGCGCN		 Misc
Kulakovskiy et al.(2013)
E2F5_MOUSE.H11MO.0.B 		0.433 0.433
E2F1
M09521_2.00 		Homo sapiens
NNGGCGGGAA
TTCCCGCCNN		 Misc
Heinz et al.(2010)
Hela-E2F1_GSE22478 		0.433 0.433
E2F1
M10444_2.00 		Homo sapiens
THVGCGCGAAAAHKR
YMDTTTTCGCGCBDA		 Transfac
Matys et al.(2006)
V$E2F_01 		0.433 0.433
E2F1
M10445_2.00 		Homo sapiens
BHKSGCGCSAAA
TTTSGCGCSMDV		 Transfac
Matys et al.(2006)
V$E2F_03 		0.433 0.433
E2F1
M10446_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F1_01 		0.433 0.433
E2F1
M10447_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F1_02 		0.433 0.433
E2F1
M10448_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F1_Q3_01 		0.433 0.433
E2F1
M10449_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F1_Q3 		0.433 0.433
E2F1
M10450_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F1_Q4_01 		0.433 0.433
E2F1
M10451_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F1_Q4_02 		0.433 0.433
E2F1
M10452_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F1_Q4 		0.433 0.433
E2F1
M10453_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F1_Q6 		0.433 0.433
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI01119100.t1 E2F 1790 1849

Links

Other E2F family TFs
Other Haemonchus contortus TFs

526 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb10g000460 Sorghum bicolor Sb10g000460 I 0.000
OGLUM04G19900 Oryza glumaepatula OGLUM04G19900 I 0.000
OGLUM06G00210 Oryza glumaepatula OGLUM06G00210 I 0.000
OMERI03G30800 Oryza meridionalis OMERI03G30800 I 0.000
OMERI04G25730 Oryza meridionalis OMERI04G25730 I 0.000
OMERI06G00230 Oryza meridionalis OMERI06G00230 I 0.000
ONIVA04G18230 Oryza nivara ONIVA04G18230 I 0.000
ONIVA06G00260 Oryza nivara ONIVA06G00260 I 0.000
OPUNC04G17680 Oryza punctata OPUNC04G17680 I 0.000
OPUNC06G00220 Oryza punctata OPUNC06G00220 I 0.000
ORGLA04G0171200 Oryza glaberrima ORGLA04G0171200 I 0.000
ORGLA06G0002300 Oryza glaberrima ORGLA06G0002300 I 0.000
ORUFI04G21580 Oryza rufipogon ORUFI04G21580 I 0.000
ORUFI06G00250 Oryza rufipogon ORUFI06G00250 I 0.000
OS04G0536500 Oryza sativa OS04G0536500 I 0.000
OS06G0104200 Oryza sativa OS06G0104200 I 0.000
BGIOSGA014649 Oryza indica BGIOSGA014649 I 0.000
SELMODRAFT_402243 Selaginella moellendorffii SELMODRAFT_402243 I 0.000
SELMODRAFT_408624 Selaginella moellendorffii SELMODRAFT_408624 I 0.000
Si006829m.g Setaria italica Si006829m.g I 0.000
Si010504m.g Setaria italica Si010504m.g I 0.000
Si022723m.g Setaria italica Si022723m.g I 0.000
Traes_4AL_F853C8660 Triticum aestivum Traes_4AL_F853C8660 I 0.000
Traes_7AS_6398221B7 Triticum aestivum Traes_7AS_6398221B7 I 0.000
Traes_7DS_7F0AF83B0 Triticum aestivum Traes_7DS_7F0AF83B0 I 0.000
TRIUR3_08851 Triticum urartu TRIUR3_08851 I 0.000
Gorai.003G169000 Gossypium raimondii Gorai.003G169000 I 0.000
Pavir.Da02426 Panicum virgatum Pavir.Da02426 I 0.000
Pavir.Gb00744 Panicum virgatum Pavir.Gb00744 I 0.000
Pavir.J07126 Panicum virgatum Pavir.J07126 I 0.000
Pavir.J26987 Panicum virgatum Pavir.J26987 I 0.000
OBART06G00240 Oryza barthii OBART06G00240 I 0.000
BGIOSGA022108 Oryza indica BGIOSGA022108 I 0.000
BRADI1G52187 Brachypodium distachyon BRADI1G52187 I 0.000
F775_07224 Aegilops tauschii F775_07224 I 0.000
GRMZM2G041668 Zea mays GRMZM2G041668 I 0.000
GRMZM2G052239 Zea mays GRMZM2G052239 I 0.000
GRMZM2G440219 Zea mays GRMZM2G440219 I 0.000
GSMUA_Achr11G17510_001 Musa acuminata GSMUA_Achr11G17510_001 I 0.000
GSMUA_Achr8G11590_001 Musa acuminata GSMUA_Achr8G11590_001 I 0.000
LPERR04G16200 Leersia perrieri LPERR04G16200 I 0.000
MLOC_53086 Hordeum vulgare MLOC_53086 I 0.000
OBART04G20020 Oryza barthii OBART04G20020 I 0.000
OB04G27030 Oryza brachyantha OB04G27030 I 0.000
OB06G10310 Oryza brachyantha OB06G10310 I 0.000
TRIUR3_10971 Triticum urartu TRIUR3_10971 N 0.000
Traes_2BL_CBFB7D720 Triticum aestivum Traes_2BL_CBFB7D720 N 0.000
Traes_2DL_607AD3522 Triticum aestivum Traes_2DL_607AD3522 N 0.000
F775_12735 Aegilops tauschii F775_12735 N 0.000
Traes_7DL_DF64397D7 Triticum aestivum Traes_7DL_DF64397D7 N 0.000
F775_00942 Aegilops tauschii F775_00942 N 0.000
TRIUR3_06372 Triticum urartu TRIUR3_06372 N 0.000
BRADI5G27467 Brachypodium distachyon BRADI5G27467 N 0.000
TRIUR3_10969 Triticum urartu TRIUR3_10969 N 0.000
Traes_2AL_F001B4F26 Triticum aestivum Traes_2AL_F001B4F26 N 0.000
TRIUR3_24878 Triticum urartu TRIUR3_24878 N 0.000
e_gw1.70.85.1 Physcomitrella patens e_gw1.70.85.1 N 0.000
BRADI3G13117 Brachypodium distachyon BRADI3G13117 N 0.000
OGLUM08G00350 Oryza glumaepatula OGLUM08G00350 N 0.000
BGIOSGA027807 Oryza indica BGIOSGA027807 N 0.000
OBART08G00290 Oryza barthii OBART08G00290 N 0.000
Pavir.J20890 Panicum virgatum Pavir.J20890 N 0.000
AC212859.3_FG008 Zea mays AC212859.3_FG008 N 0.000
Pavir.J31179 Panicum virgatum Pavir.J31179 N 0.000
Sb07g000470 Sorghum bicolor Sb07g000470 N 0.000
OPUNC08G00360 Oryza punctata OPUNC08G00360 N 0.000
MLOC_19933 Hordeum vulgare MLOC_19933 N 0.000
LPERR08G00380 Leersia perrieri LPERR08G00380 N 0.000
ONIVA08G00280 Oryza nivara ONIVA08G00280 N 0.000
MLOC_67250 Hordeum vulgare MLOC_67250 N 0.000
ORUFI08G00330 Oryza rufipogon ORUFI08G00330 N 0.000
GSMUA_Achr3G22360_001 Musa acuminata GSMUA_Achr3G22360_001 N 0.000
OS08G0103900 Oryza sativa OS08G0103900 N 0.000
Sb06g034010 Sorghum bicolor Sb06g034010 N 0.000
Traes_2BL_0AED4E377 Triticum aestivum Traes_2BL_0AED4E377 N 0.000
OMERI08G00600 Oryza meridionalis OMERI08G00600 N 0.000
GRMZM2G048826 Zea mays GRMZM2G048826 N 0.000
OB08G10370 Oryza brachyantha OB08G10370 N 0.000
F775_52611 Aegilops tauschii F775_52611 N 0.000
F775_16517 Aegilops tauschii F775_16517 N 0.000
Traes_2AL_8EE7F34F6 Triticum aestivum Traes_2AL_8EE7F34F6 N 0.000
Traes_2AL_C0670BBDD Triticum aestivum Traes_2AL_C0670BBDD N 0.000
Traes_2AL_CB84F42D2 Triticum aestivum Traes_2AL_CB84F42D2 N 0.000
MLOC_66083 Hordeum vulgare MLOC_66083 N 0.000