BTMF_0000305001 (Brugia timori)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) BTMF_0000305001 T174911_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.941 0.941
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.926 0.926
EBF2
M10466_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_02 		0.926 0.926
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.912 0.912
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.912 0.912
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.912 0.912
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.912 0.912
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.897 0.897
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.897 0.897
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BTMF_0000305001-mRNA-1 EBF1 1 68

Links

Other EBF1 family TFs
Other Brugia timori TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_042360 Theobroma cacao TCM_042360 N
Traes_7DL_7DDA16622 Triticum aestivum Traes_7DL_7DDA16622 N
Traes_7DL_70D4FDB2A Triticum aestivum Traes_7DL_70D4FDB2A N
Traes_7BL_096916DC5 Triticum aestivum Traes_7BL_096916DC5 N
Traes_7AL_C7CF7087B Triticum aestivum Traes_7AL_C7CF7087B N
Traes_7AL_A8CAE984E Triticum aestivum Traes_7AL_A8CAE984E N
Traes_5DS_4F7973584 Triticum aestivum Traes_5DS_4F7973584 N
Traes_5BS_FC54F9BEA Triticum aestivum Traes_5BS_FC54F9BEA N
Traes_5AS_6F02C9967 Triticum aestivum Traes_5AS_6F02C9967 N
Traes_1AL_00A8A2030 Triticum aestivum Traes_1AL_00A8A2030 N
TRIUR3_01653 Triticum urartu TRIUR3_01653 N
Si037105m.g Setaria italica Si037105m.g N
Si007107m.g Setaria italica Si007107m.g N
SELMODRAFT_414462 Selaginella moellendorffii SELMODRAFT_414462 N
SELMODRAFT_409920 Selaginella moellendorffii SELMODRAFT_409920 N
Sb10g030250 Sorghum bicolor Sb10g030250 N
Sb09g024290 Sorghum bicolor Sb09g024290 N
PRUPE_ppa019868mg Prunus persica PRUPE_ppa019868mg N
POPTR_0003s20320 Populus trichocarpa POPTR_0003s20320 N
POPTR_0001s05750 Populus trichocarpa POPTR_0001s05750 N
MDP0000893802 Malus domestica MDP0000893802 N
PDK_20s1365351g001 Phoenix dactylifera PDK_20s1365351g001 N
SapurV1A.0445s0220 Salix purpurea SapurV1A.0445s0220 N
SapurV1A.0009s0600 Salix purpurea SapurV1A.0009s0600 N
Pavir.J25286 Panicum virgatum Pavir.J25286 N
Pavir.J21984 Panicum virgatum Pavir.J21984 N
Pavir.J05283 Panicum virgatum Pavir.J05283 N
Pavir.J00911 Panicum virgatum Pavir.J00911 N
Pavir.Db00007 Panicum virgatum Pavir.Db00007 N
MDP0000898701 Malus domestica MDP0000898701 N
OS11G0139500 Oryza sativa OS11G0139500 N
MDP0000190186 Malus domestica MDP0000190186 N
Lus10016368.g Linum usitatissimum Lus10016368.g N
Aquca_075_00033 Aquilegia coerulea Aquca_075_00033 N
gw1.34.187.1 Physcomitrella patens gw1.34.187.1 N
Pm016548 Prunus mume Pm016548 N
ATBZIP24 Vitis vinifera VIT_13s0158g00380 N
TRIUR3_23486 Triticum urartu TRIUR3_23486 N
TRIUR3_17772 Triticum urartu TRIUR3_17772 N
TRIUR3_12850 Triticum urartu TRIUR3_12850 N
GLYMA11G16050 Glycine max GLYMA11G16050 N
MLOC_13410 Hordeum vulgare MLOC_13410 N
LPERR12G02240 Leersia perrieri LPERR12G02240 N
LPERR11G02130 Leersia perrieri LPERR11G02130 N
LPERR06G23100 Leersia perrieri LPERR06G23100 N
GSMUA_Achr7G03840_001 Musa acuminata GSMUA_Achr7G03840_001 N
GSMUA_Achr4G00320_001 Musa acuminata GSMUA_Achr4G00320_001 N
GRMZM2G175870 Zea mays GRMZM2G175870 N
GRMZM2G055413 Zea mays GRMZM2G055413 N
GRMZM2G000171 Zea mays GRMZM2G000171 N
MLOC_60894 Hordeum vulgare MLOC_60894 N
F775_29696 Aegilops tauschii F775_29696 N
F775_17324 Aegilops tauschii F775_17324 N
F775_17323 Aegilops tauschii F775_17323 N
F775_08202 Aegilops tauschii F775_08202 N
F775_07298 Aegilops tauschii F775_07298 N
BRADI1G30140 Brachypodium distachyon BRADI1G30140 N
Bo9g024230 Brassica oleracea Bo9g024230 N
BGIOSGA036957 Oryza indica BGIOSGA036957 N
BGIOSGA034759 Oryza indica BGIOSGA034759 N
OMERI06G27590 Oryza meridionalis OMERI06G27590 N
OS06G0716800 Oryza sativa OS06G0716800 N
ORUFI12G02510 Oryza rufipogon ORUFI12G02510 N
ORUFI06G29500 Oryza rufipogon ORUFI06G29500 N
ORGLA06G0232500 Oryza glaberrima ORGLA06G0232500 N
OPUNC12G02170 Oryza punctata OPUNC12G02170 N
OPUNC06G25210 Oryza punctata OPUNC06G25210 N
ONIVA11G02620 Oryza nivara ONIVA11G02620 N
ONIVA06G30110 Oryza nivara ONIVA06G30110 N
OMERI12G01070 Oryza meridionalis OMERI12G01070 N
BGIOSGA020526 Oryza indica BGIOSGA020526 N
OLONG_023558 Oryza longistaminata OLONG_023558 N
OGLUM06G28970 Oryza glumaepatula OGLUM06G28970 N
OBART12G02110 Oryza barthii OBART12G02110 N
OBART11G02390 Oryza barthii OBART11G02390 N
OBART06G27540 Oryza barthii OBART06G27540 N
OB12G12480 Oryza brachyantha OB12G12480 N
OB06G35370 Oryza brachyantha OB06G35370 N
OB05G28920 Oryza brachyantha OB05G28920 N
OB0044G10110 Oryza brachyantha OB0044G10110 N