D917_06660 (Trichinella nativa)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) D917_06660 T174916_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.788 0.788
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.765 0.765
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.761 0.761
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.761 0.761
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.761 0.761
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.748 0.748
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.748 0.748
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.743 0.743
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
D917_06660 EBF1 29 254

Links

Other EBF1 family TFs
Other Trichinella nativa TFs

314 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_10378 Aspergillus nidulans CADANIAG00009880 D
NCU06399 Neurospora crassa NCU06399 D
CIMG_08892 Coccidioides immitis CIMG_08892 I
MCYG_02695 Microsporum canis MCYG_02695 I
SNOG_08036 Stagonospora nodorum SNOG_08036 I
A1O1_02576 Capronia coronata A1O1_02576 I
A1O3_05449 Capronia epimyces A1O3_05449 I
A1O5_01242 Cladophialophora psammophila A1O5_01242 I
A1O7_08736 Cladophialophora yegresii A1O7_08736 I
A1O9_12266 Exophiala aquamarina A1O9_12266 I
ACRE_013080 Acremonium chrysogenum ACRE_013080 I
AOL_s00043g74 Arthrobotrys oligospora AOL_s00043g74 I
ARB_05956 Arthroderma benhamiae ARB_05956 I
AUEXF2481DRAFT_4094 Aureobasidium subglaciale AUEXF2481DRAFT_4094 I
BAUCODRAFT_269899 Baudoinia compniacensis BAUCODRAFT_269899 I
BBA_00488 Beauveria bassiana BBA_00488 I
BDDG_07691 Blastomyces dermatitidis BDDG_07691 I
BGHDH14_bgh03757 Blumeria graminis BGHDH14_bgh03757 I
ACLA_055970 Aspergillus clavatus CADACLAG00005179 I
CADAFLAG00008024 Aspergillus flavus CADAFLAG00008024 I
AFUA_4G02940 Aspergillus fumigatus CADAFUAG00001401 I
CADANGAG00011236 Aspergillus niger CADANGAG00011236 I
CADAORAG00000177 Aspergillus oryzae CADAORAG00000177 I
ATEG_07901 Aspergillus terreus CADATEAG00000497 I
NFIA_030610 Neosartorya fischeri CADNFIAG00002762 I
CCM_04263 Cordyceps militaris CCM_04263 I
CFIO01_07847 Colletotrichum fioriniae CFIO01_07847 I
CGGC5_1206 Colletotrichum gloeosporioides CGGC5_1206 I
CH063_13592 Colletotrichum higginsianum CH063_13592 I
CMQ_2549 Grosmannia clavigera CMQ_2549 I
Cob_10575 Colletotrichum orbiculare Cob_10575 I
COCC4DRAFT_40407 Bipolaris maydis COCC4DRAFT_40407 I
COCCADRAFT_6984 Bipolaris zeicola COCCADRAFT_6984 I
COCMIDRAFT_33369 Bipolaris oryzae COCMIDRAFT_33369 I
COCSADRAFT_97657 Bipolaris sorokiniana COCSADRAFT_97657 I
COCVIDRAFT_17332 Bipolaris victoriae COCVIDRAFT_17332 I
CPC735_064040 Coccidioides posadasii CPC735_064040 I
CPUR_06057 Claviceps purpurea CPUR_06057 I
CSUB01_02829 Colletotrichum sublineola CSUB01_02829 I
CTHT_0032650 Chaetomium thermophilum CTHT_0032650 I
DRE_06529 Drechslerella stenobrocha DRE_06529 I
EPUS_01825 Endocarpon pusillum EPUS_01825 I
EURHEDRAFT_411156 Aspergillus ruber EURHEDRAFT_411156 I
EV44_g4901 Erysiphe necator EV44_g4901 I
F503_08759 Ophiostoma piceae uamh F503_08759 I
FFUJ_04663 Fusarium fujikuroi FFUJ_04663 I
FGRRES_09832 Fusarium graminearum FGRRES_09832 I
FOXG_08221 Fusarium oxysporum FOXG_08221 I
FPSE_10348 Fusarium pseudograminearum FPSE_10348 I
FVEG_06450 Fusarium verticillioides FVEG_06450 I
G647_07711 Cladophialophora carrionii G647_07711 I
GGTG_08387 Gaeumannomyces graminis GGTG_08387 I
GLRG_02817 Colletotrichum graminicola GLRG_02817 I
GSTUM_00012070001 Tuber melanosporum GSTUM_00012070001 I
H072_3248 Dactylellina haptotyla H072_3248 I
H102_02845 Trichophyton rubrum H102_02845 I
H105_02864 Trichophyton soudanense H105_02864 I
HCBG_08448 Histoplasma capsulatum HCBG_08448 I
HMPREF1120_07358 Exophiala dermatitidis HMPREF1120_07358 I
HMPREF1541_04204 Cyphellophora europaea HMPREF1541_04204 I
HMPREF1624_06072 Sporothrix schenckii HMPREF1624_06072 I
LEMA_P075830.1 Leptosphaeria maculans LEMA_P075830.1 I
M437DRAFT_18084 Aureobasidium melanogenum M437DRAFT_18084 I
M7I_6846 Glarea lozoyensis M7I_6846 I
MAC_06402 Metarhizium acridum MAC_06402 I
MAJ_07228 Metarhizium majus MAJ_07228 I
MAM_03966 Metarhizium album MAM_03966 I
MANI_020708 Metarhizium anisopliae MANI_020708 I
MBM_06253 Marssonina brunnea MBM_06253 I
MBR_00309 Metarhizium brunneum MBR_00309 I
MCYG_02695 Arthroderma otae MCYG_02695 I
MGG_06131 Magnaporthe oryzae MGG_06131 I
MGU_01258 Metarhizium guizhouense MGU_01258 I
MGYG_08430 Microsporum gypseum MGYG_08430 I
MPH_02812 Macrophomina phaseolina MPH_02812 I
MYCTH_2299061 Myceliophthora thermophila MYCTH_2299061 I
NechaG76538 Fusarium solani NechaG76538 I
NEUTE1DRAFT_121024 Neurospora tetrasperma NEUTE1DRAFT_121024 I
OCS_02153 Ophiocordyceps sinensis OCS_02153 I
PAAG_01597 Paracoccidioides sp lutzii PAAG_01597 I
PCH_Pc12g13890 Penicillium rubens PCH_Pc12g13890 I
PDE_01297 Penicillium oxalicum PDE_01297 I
PDIP_77620 Penicillium digitatum PDIP_77620 I
PEX1_065040 Penicillium expansum PEX1_065040 I
PFICI_05721 Pestalotiopsis fici PFICI_05721 I
PITC_048290 Penicillium italicum PITC_048290 I
PMAA_006130 Talaromyces marneffei PMAA_006130 I
PODANS_3_4790 Podospora anserina PODANS_3_4790 I
PTRG_08316 Pyrenophora triticirepentis PTRG_08316 I
PTT_12277 Pyrenophora teres PTT_12277 I
PV04_09319 Capronia semiimmersa PV04_09319 I
PV05_00805 Exophiala xenobiotica PV05_00805 I
PV06_05138 Exophiala oligosperma PV06_05138 I
PV07_00488 Cladophialophora immunda PV07_00488 I
PV08_09059 Exophiala spinifera PV08_09059 I
PV09_01316 Verruconis gallopava PV09_01316 I
PV10_04959 Exophiala mesophila PV10_04959 I
PV11_02396 Exophiala sideris PV11_02396 I
S40285_06955 Stachybotrys chlorohalonata S40285_06955 I
S40288_05306 Stachybotrys chartarum S40288_05306 I
SAPIO_CDS7180 Scedosporium apiospermum SAPIO_CDS7180 I
SEPMUDRAFT_150066 Sphaerulina musiva SEPMUDRAFT_150066 I
SETTUDRAFT_96438 Setosphaeria turcica SETTUDRAFT_96438 I
SNOG_08036 Phaeosphaeria nodorum SNOG_08036 I
SPBR_00166 Sporothrix brasiliensis SPBR_00166 I
SS1G_13065 Sclerotinia sclerotiorum SS1G_13065 I
THITE_2115495 Thielavia terrestris THITE_2115495 I
TRIATDRAFT_168746 Trichoderma atroviride TRIATDRAFT_168746 I
TRIREDRAFT_41573 Trichoderma reesei TRIREDRAFT_41573 I
TRIVIDRAFT_192202 Trichoderma virens TRIVIDRAFT_192202 I
TRV_07458 Trichophyton verrucosum TRV_07458 I
TSTA_104870 Talaromyces stipitatus TSTA_104870 I
U727_0043258041 Penicillium solitum U727_0043258041 I
UCRNP2_2391 Neofusicoccum parvum UCRNP2_2391 I
UREG_02800 Uncinocarpus reesii UREG_02800 I
UV8b_314 Ustilaginoidea virens UV8b_314 I
VDAG_08933 Verticillium dahliae VDAG_08933 I
VHEMI03455 Torrubiella hemipterigena VHEMI03455 I
W97_04573 Coniosporium apollinis W97_04573 I
X797_002671 Metarhizium robertsii X797_002671 I
Z517_01506 Fonsecaea pedrosoi Z517_01506 I
Z518_05180 Rhinocladiella mackenziei Z518_05180 I
Z519_08509 Cladophialophora bantiana Z519_08509 I
fgenesh1_kg.C_scaffold_5000057 Cochliobolus heterostrophus C5 fgenesh1_kg.C_scaffold_5000057 I
fgenesh1_pg.sca_18_chr2_1_0000729 Nectria haematococca fgenesh1_pg.sca_18_chr2_1_0000729 I
scaffold_3-snap.528.1 Neurospora discreta scaffold_3-snap.528.1 I
e_gw1.00710.230.1 Aspergillus carbonarius e_gw1.00710.230.1 I
estExt_fgenesh1_pm.C_30735 Cryphonectria parasitica estExt_fgenesh1_pm.C_30735 I
Pc12g13890 Penicillium chrysogenum Pc12g13890 I
PMAA_006130 Penicillium marneffei PMAA_006130 I
MYCFIDRAFT_89211 Pseudocercospora fijiensis MYCFIDRAFT_89211 N
estExt_fgenesh1_pg.C_400021 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_400021 N