CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

LotgiG121767 *(Lottia gigantea)* Ets
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00178 (Ets)	IPR000418	LotgiG121767	T177442_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
EHF M02987_2.00	Homo sapiens	NACCCGGAAGTD	HACTTCCGGGTN	SELEX Jolma et al.(2013) EHF_1	0.965	0.605
EHF M02733_2.00	Homo sapiens	ACCCGGAART	AYTTCCGGGT	SELEX Jolma et al.(2010) EHF_full_length_monomer	0.965	0.605
EHF M09053_2.00	Homo sapiens	NNANVAGGAAGTDVV	BBHACTTCCTBNTNN	Misc Kulakovskiy et al.(2013) EHF_HUMAN.H11MO.0.B	0.965	0.605
EHF M09533_2.00	Homo sapiens	WNVMGGAARY	RYTTCCKBNW	Misc Heinz et al.(2010) LoVo-EHF_GSE49402	0.965	0.605
EHF M10500_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$EHF_Q6	0.965	0.605
Ehf M00158_2.00	Mus musculus	DNVMGGAARY	RYTTCCKBNH	PBM Badis et al.(2009) Ehf_3056	0.946	0.593
Ehf M01484_2.00	Mus musculus	DNVMGGAARY	RYTTCCKBNH	PBM Wei et al.(2010) Ehf	0.946	0.593
Ehf M09071_2.00	Mus musculus	NNANVAGGAAGTDVV	BBHACTTCCTBNTNN	Misc Kulakovskiy et al.(2013) EHF_MOUSE.H11MO.0.B	0.946	0.593
Elf3 M00156_2.00	Mus musculus	NNVVGGAARN	NYTTCCBBNN	PBM Badis et al.(2009) Elf3_3876	0.926	0.531
Elf3 M01476_2.00	Mus musculus	NNNNRDAWVN	NBWTHYNNNN	PBM Wei et al.(2010) Elf3	0.926	0.531
ELF3 M03002_2.00	Homo sapiens	WACCCGGAAGTR	YACTTCCGGGTW	SELEX Jolma et al.(2013) ELF3_1	0.926	0.531
ELF3 M03003_2.00	Homo sapiens	WACCCGGAAGTRD	HYACTTCCGGGTW	SELEX Jolma et al.(2013) ELF3_2	0.926	0.531
ELF3 M04788_2.00	Homo sapiens	ACSCGGAAGTRVNNNNNNDWWWW	WWWWHNNNNNNBYACTTCCGSGT	SELEX Yin et al.(2017) ELF3_FL_HT-SELEX_1	0.926	0.531
ELF3 M04789_2.00	Homo sapiens	NTGTGCGGATGCV	BGCATCCGCACAN	SELEX Yin et al.(2017) ELF3_FL_HT-SELEX_2	0.926	0.531
ELF3 M04783_2.00	Homo sapiens	ACVCGGAAGTRNNNNNNNNWWWW	WWWWNNNNNNNNYACTTCCGBGT	SELEX Yin et al.(2017) ELF3_eDBD_HT-SELEX_1	0.926	0.531
ELF3 M04784_2.00	Homo sapiens	VATAACGGATGYN	NRCATCCGTTATB	SELEX Yin et al.(2017) ELF3_eDBD_HT-SELEX_2	0.926	0.531
ELF3 M04785_2.00	Homo sapiens	VATDGCGGATGCN	NGCATCCGCHATB	SELEX Yin et al.(2017) ELF3_eDBD_HT-SELEX_3	0.926	0.531
ELF3 M04786_2.00	Homo sapiens	NWTRCGGAWGCN	NGCWTCCGYAWN	SELEX Yin et al.(2017) ELF3_eDBD_HT-SELEX_4	0.926	0.531
ELF3 M09060_2.00	Homo sapiens	NNANVAGGAARTDV	BHAYTTCCTBNTNN	Misc Kulakovskiy et al.(2013) ELF3_HUMAN.H11MO.0.A	0.926	0.531
Elf3 M09066_2.00	Mus musculus	NNANVAGGAARTDV	BHAYTTCCTBNTNN	Misc Kulakovskiy et al.(2013) ELF3_MOUSE.H11MO.0.B	0.926	0.531
ELF3 M10515_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ESE1_Q3	0.926	0.531
ELF3 M10516_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ESE1_Q6	0.926	0.531
ELF3 M04787_2.00	Homo sapiens	ACVAGGAAGTRVNNNNNNWWWWW	WWWWWNNNNNNBYACTTCCTBGT	SELEX Yin et al.(2017) ELF3_eDBD_Methyl-HT-SELEX	0.926	0.531
ELF3 M04790_2.00	Homo sapiens	ACMAGGAAGTAVNDDHNHDAWWW	WWWTHDNDHHNBTACTTCCTKGT	SELEX Yin et al.(2017) ELF3_FL_Methyl-HT-SELEX	0.926	0.531
ETV7 M04712_2.00	Homo sapiens	VVGGAAGYRCTTCCBB	VVGGAAGYRCTTCCBB	SELEX Yin et al.(2017) ETV7_FL_HT-SELEX_1	0.826	0.469
ETV7 M04713_2.00	Homo sapiens	RYTTCCSGGAARY	RYTTCCSGGAARY	SELEX Yin et al.(2017) ETV7_FL_HT-SELEX_2	0.826	0.469
ETV7 M10471_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TEL2_Q6	0.826	0.469
ETV7 M04714_2.00	Homo sapiens	NNGGAAGYRCTTCCNN	NNGGAAGYRCTTCCNN	SELEX Yin et al.(2017) ETV7_FL_Methyl-HT-SELEX_1	0.826	0.469
ETV7 M04715_2.00	Homo sapiens	RYTTCCNGGAARY	RYTTCCNGGAARY	SELEX Yin et al.(2017) ETV7_FL_Methyl-HT-SELEX_2	0.826	0.469
Elf5 M01490_2.00	Mus musculus	DNVVGGAARH	DYTTCCBBNH	PBM Wei et al.(2010) Elf5	0.774	0.519
ELF5 M02988_2.00	Homo sapiens	WNVMGGAAGTN	NACTTCCKBNW	SELEX Jolma et al.(2013) ELF5_1	0.774	0.519
ELF5 M02989_2.00	Homo sapiens	WNVMGGAARYN	NRYTTCCKBNW	SELEX Jolma et al.(2013) ELF5_2	0.774	0.519
Elf5 M03011_2.00	Mus musculus	WNVMGGAARYN	NRYTTCCKBNW	SELEX Jolma et al.(2013) Elf5_1	0.774	0.519
ELF5 M04756_2.00	Homo sapiens	NDNVMGGAAGBD	HVCTTCCKBNHN	SELEX Yin et al.(2017) ELF5_eDBD_HT-SELEX	0.774	0.519
ELF5 M04758_2.00	Homo sapiens	NAMCCGGAAGYN	NRCTTCCGGKTN	SELEX Yin et al.(2017) ELF5_FL_HT-SELEX	0.774	0.519
ELF5 M09054_2.00	Homo sapiens	VVVANVMGGAAGHDV	BHDCTTCCKBNTBBB	Misc Kulakovskiy et al.(2013) ELF5_HUMAN.H11MO.0.A	0.774	0.519
Elf5 M09076_2.00	Mus musculus	RGRAVRAGGAAGDRRNN	NNYYHCTTCCTYBTYCY	Misc Kulakovskiy et al.(2013) ELF5_MOUSE.H11MO.0.A	0.774	0.519
ELF5 M09534_2.00	Homo sapiens	ABVMGGAAGT	ACTTCCKBVT	Misc Heinz et al.(2010) T47D-ELF5_GSE30407	0.774	0.519
ELF5 M10501_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ELF5_01	0.774	0.519
ELF5 M04757_2.00	Homo sapiens	NABVAGGAAGTD	HACTTCCTBVTN	SELEX Yin et al.(2017) ELF5_eDBD_Methyl-HT-SELEX	0.774	0.519
ELF5 M04759_2.00	Homo sapiens	DABVAGGAAGTD	HACTTCCTBVTH	SELEX Yin et al.(2017) ELF5_FL_Methyl-HT-SELEX	0.774	0.519
Etv6 M01491_2.00	Mus musculus	NNNVGGAARH	DYTTCCBNNN	PBM Wei et al.(2010) Etv6	0.769	0.444
Etv6 M09077_2.00	Mus musculus	NSAGGAARB	VYTTCCTSN	Misc Kulakovskiy et al.(2013) ETV6_MOUSE.H11MO.0.C	0.769	0.444
Eip74EF M03723_2.00	Drosophila melanogaster	WACCCGGAAGTR	YACTTCCGGGTW	SELEX Nitta et al.(2015) Eip74EF_1	0.731	0.395
Eip74EF M03724_2.00	Drosophila melanogaster	WABSCGGAAGTR	YACTTCCGSVTW	SELEX Nitta et al.(2015) Eip74EF_2	0.731	0.395
Eip74EF M06186_2.00	Drosophila melanogaster	WHMAGGAAKT	AMTTCCTKDW	B1H Zhu et al.(2011) Eip74EF_FlyReg_FBgn0000567	0.731	0.395
Eip74EF M06187_2.00	Drosophila melanogaster	ACCCGGAAGT	ACTTCCGGGT	B1H Zhu et al.(2011) Eip74EF_SANGER_5_FBgn0000567	0.731	0.395
Eip74EF M02679_2.00	Drosophila melanogaster	CMGGAAR	YTTCCKG	SELEX Mathelier et al.(2014) MA0026.1	0.731	0.395
Eip74EF M09667_2.00	Drosophila melanogaster	VWHMMGGAART	AYTTCCKKDWB	Misc Kulakovskiy et al.(2009) Eip74EF	0.731	0.395
Eip74EF M10521_2.00	Drosophila melanogaster	NNAAYCMGGAARTNNDV	BHNNAYTTCCKGRWTNN	Transfac Matys et al.(2006) I$E74A_01	0.731	0.395
For this family, TFs with SR scores > 0.717* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
LotgiP121767	Ets	6	90	HLWEFVRDLLKDSSVNPSYLKWEDKSTGVFRFVNSEAIARLWGKKKNNKQMTYEKLSRAMRLSFMYFFIGLEDGKFPKKLCFKFG

Links
Other Ets family TFs
Other *Lottia gigantea* TFs

480 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AT1G71200	Arabidopsis thaliana	AT1G71200	N
Bostr.10273s0226	Boechera stricta	Bostr.10273s0226	N
Cagra.0147s0022	Capsella grandiflora	Cagra.0147s0022	N
Carubv10021349m.g	Capsella rubella	Carubv10021349m.g	N

LotgiG121767 (Lottia gigantea) Ets

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

480 Related TFs

LotgiG121767 **(Lottia gigantea)
Ets**