CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Myotis_brandtii_ELK3_10025590 *(Myotis brandtii)* Ets
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00178 (Ets)	IPR000418	Myotis_brandtii_ELK3_10025590	T177844_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ELK3 M02969_2.00	Homo sapiens	RCCGGAAGTN	NACTTCCGGY	SELEX Jolma et al.(2013) ELK3_1	0.857	0.537
ELK3 M04730_2.00	Homo sapiens	NRCCGGAAGYN	NRCTTCCGGYN	SELEX Yin et al.(2017) ELK3_eDBD_HT-SELEX_1	0.857	0.537
ELK3 M04731_2.00	Homo sapiens	STCGTAAATRCM	KGYATTTACGAS	SELEX Yin et al.(2017) ELK3_eDBD_HT-SELEX_2	0.857	0.537
ELK3 M04733_2.00	Homo sapiens	RCCGGAAGTN	NACTTCCGGY	SELEX Yin et al.(2017) ELK3_FL_HT-SELEX_1	0.857	0.537
ELK3 M04734_2.00	Homo sapiens	CTCGTAAATGCN	NGCATTTACGAG	SELEX Yin et al.(2017) ELK3_FL_HT-SELEX_2	0.857	0.537
ELK3 M10481_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NET_Q6_01	0.857	0.537
ELK3 M10482_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NET_Q6	0.857	0.537
ELK3 M04732_2.00	Homo sapiens	NRCCGGAAGYN	NRCTTCCGGYN	SELEX Yin et al.(2017) ELK3_eDBD_Methyl-HT-SELEX	0.857	0.537
ELK3 M04735_2.00	Homo sapiens	NRCCGGAAGYN	NRCTTCCGGYN	SELEX Yin et al.(2017) ELK3_FL_Methyl-HT-SELEX	0.857	0.537
Elk3 M01481_2.00	Mus musculus	NNSCGGAAVY	RBTTCCGSNN	PBM Wei et al.(2010) Elk3	0.857	0.530
Elk3 M03010_2.00	Mus musculus	ACCGGAAGTD	HACTTCCGGT	SELEX Jolma et al.(2013) Elk3_1	0.857	0.530
Elk4 M01489_2.00	Mus musculus	NNVCGGAWRH	DYWTCCGBNN	PBM Wei et al.(2010) Elk4	0.822	0.450
Elk4 M09075_2.00	Mus musculus	VVRVMGGAARYRN	NYRYTTCCKBYBB	Misc Kulakovskiy et al.(2013) ELK4_MOUSE.H11MO.0.B	0.822	0.450
Elk1 M01483_2.00	Mus musculus	NNCCGGAARY	RYTTCCGGNN	PBM Wei et al.(2010) Elk1	0.793	0.443
ELK1 M02979_2.00	Homo sapiens	DCCGGAAGTN	NACTTCCGGH	SELEX Jolma et al.(2013) ELK1_1	0.793	0.443
ELK1 M02980_2.00	Homo sapiens	ACCGGAAGTD	HACTTCCGGT	SELEX Jolma et al.(2013) ELK1_2	0.793	0.443
ELK1 M02981_2.00	Homo sapiens	NRYTTCCGSCGGAAGTN	NACTTCCGSCGGAARYN	SELEX Jolma et al.(2013) ELK1_3	0.793	0.443
ELK1 M02982_2.00	Homo sapiens	RCCGGAAGTN	NACTTCCGGY	SELEX Jolma et al.(2013) ELK1_4	0.793	0.443
ELK1 M04752_2.00	Homo sapiens	NRCCGGAAGTN	NACTTCCGGYN	SELEX Yin et al.(2017) ELK1_eDBD_HT-SELEX	0.793	0.443
ELK1 M04754_2.00	Homo sapiens	NDSCGGAWGYN	NRCWTCCGSHN	SELEX Yin et al.(2017) ELK1_FL_HT-SELEX	0.793	0.443
ELK1 M09051_2.00	Homo sapiens	RCCGGAAGTGV	BCACTTCCGGY	Misc Kulakovskiy et al.(2013) ELK1_HUMAN.H11MO.0.B	0.793	0.443
Elk1 M09070_2.00	Mus musculus	VCCGGAAGTDV	BHACTTCCGGB	Misc Kulakovskiy et al.(2013) ELK1_MOUSE.H11MO.0.B	0.793	0.443
ELK1 M09531_2.00	Homo sapiens	NSCGGAAVNN	NNBTTCCGSN	Misc Heinz et al.(2010) Hela-Elk1_GSE31477	0.793	0.443
ELK1 M10488_2.00	Homo sapiens	NNNDMCGGAARBNN	NNVYTTCCGKHNNN	Transfac Matys et al.(2006) V$ELK1_02	0.793	0.443
ELK1 M10489_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ELK1_03	0.793	0.443
ELK1 M10490_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ELK1_04	0.793	0.443
ELK1 M10491_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ELK1_Q4	0.793	0.443
ELK1 M10492_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ELK1_Q6	0.793	0.443
ELK1 M04753_2.00	Homo sapiens	NRCMGGAWGYN	NRCWTCCKGYN	SELEX Yin et al.(2017) ELK1_eDBD_Methyl-HT-SELEX	0.793	0.443
ELK1 M04755_2.00	Homo sapiens	NRVMGGAWVBN	NVBWTCCKBYN	SELEX Yin et al.(2017) ELK1_FL_Methyl-HT-SELEX	0.793	0.443
elk4 M01971_2.00	Tetraodon nigroviridis	CCGGAAGT	ACTTCCGG	PBM Weirauch et al.(2014) pTH6345	0.785	0.450
ELK4 M03001_2.00	Homo sapiens	ACCGGAARYN	NRYTTCCGGT	SELEX Jolma et al.(2013) ELK4_1	0.779	0.443
ELK4 M04780_2.00	Homo sapiens	NRSCGGAWRYN	NRYWTCCGSYN	SELEX Yin et al.(2017) ELK4_FL_HT-SELEX_1	0.779	0.443
ELK4 M04781_2.00	Homo sapiens	VHCGKAAATSMN	NKSATTTMCGDB	SELEX Yin et al.(2017) ELK4_FL_HT-SELEX_2	0.779	0.443
ELK4 M08112_2.00	Homo sapiens	VCCGGAAGYVV	BBRCTTCCGGB	ChIP-seq Mathelier et al.(2014) MA0076.2	0.779	0.443
ELK4 M07957_2.00	Homo sapiens	CCGGAAGYNV	BNRCTTCCGG	ChIP-seq Gerstein et al.(2012) HEK293b_ELK4_UCD	0.779	0.443
ELK4 M07958_2.00	Homo sapiens	NVCCGGAAGYN	NRCTTCCGGBN	ChIP-seq Gerstein et al.(2012) HeLa-S3_ELK4_UCD	0.779	0.443
ELK4 M09059_2.00	Homo sapiens	VVCCGGAAGYRV	BYRCTTCCGGBB	Misc Kulakovskiy et al.(2013) ELK4_HUMAN.H11MO.0.A	0.779	0.443
ELK4 M10513_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SAP1A_01	0.779	0.443
ELK4 M10514_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SAP1A_Q6	0.779	0.443
ELK4 M04782_2.00	Homo sapiens	NRNMGGAWRYN	NRYWTCCKNYN	SELEX Yin et al.(2017) ELK4_FL_Methyl-HT-SELEX	0.779	0.443
For this family, TFs with SR scores > 0.717* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Myotis_brandtii_ELK3_10025590	Ets	6	76	TLWQFLLQLLLDQKHEHLICWTSNDGEFKLLKAEEVAKLWGLRKNKTNMNYDKLSRALRYYYDKTCQVLGS
Myotis_brandtii_ELK3_10025590	Ets	95	174	TLWQFLLQLLLDQKHEHLICWTSNDGEFKLLKAEEVAKLWGLRKNKTNMNYDKLSRALRYYYDKNIIKKVIGQKFVYKFV

Links
Other Ets family TFs
Other *Myotis brandtii* TFs

290 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
Bo6g077880	Brassica oleracea	Bo6g077880	I
Bra003462	Brassica rapa	Bra003462	I
BRADI1G04110	Brachypodium distachyon	BRADI1G04110	N
GSMUA_Achr1G23090_001	Musa acuminata	GSMUA_Achr1G23090_001	N
Pavir.Ba01557	Panicum virgatum	Pavir.Ba01557	N

Myotis_brandtii_ELK3_10025590 (Myotis brandtii) Ets

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

290 Related TFs

Myotis_brandtii_ELK3_10025590 **(Myotis brandtii)
Ets**