CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cagra.3793s0006
(
Capsella grandiflora
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Cagra.3793s0006
T181257_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.3793s0006.1.p
FAR1
44
119
DYYNSFATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLNSRTGCPAFIRVQRRDTGKWVLDQIQKEHNHELG
Cagra.3793s0006.1.p
FAR1
205
281
QFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGFQHPSRMGCGAYMRIKRQDSGGWIVDRLNKDHNHELEP
Links
Other
FAR1
family TFs
Other
Capsella grandiflora
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCEY_14351
Ancylostoma ceylanicum
ANCCEY_14351
N
0.000
HCOI00053600
Haemonchus contortus
HCOI00053600
N
0.000
HCOI00054300
Haemonchus contortus
HCOI00054300
N
0.000
HPBE_0001687501
Heligmosomoides bakeri
HPBE_0001687501
N
0.000
HPLM_0000958201
Haemonchus placei
HPLM_0000958201
N
0.000
NBR_0000527701
Nippostrongylus brasiliensis
NBR_0000527701
N
0.000
NECAME_15133
Necator americanus
NECAME_15133
N
0.000