CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene21527-v1.0-hybrid
(
Fragaria vesca
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
gene21527-v1.0-hybrid
T181440_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna21527.1-v1.0-hybrid
FAR1
95
184
AFYNAYALRVGFRTRVNDLSRSRVDGSVIARTLVCNKEGYRVADKRDRKSVRPRAPTRVGCKAMISMKKLSNGNWVVAKFVKEHAHSLTP
Links
Other
FAR1
family TFs
Other
Fragaria vesca
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA11G13610
Glycine max
GLYMA11G13610
N
0.730
GLYMA12G05600
Glycine max
GLYMA12G05600
N
0.711
PRUPE_ppa008878mg
Prunus persica
PRUPE_ppa008878mg
N
0.878
PRUPE_ppa011567mg
Prunus persica
PRUPE_ppa011567mg
N
0.711
VIT_05s0102g00690
Vitis vinifera
VIT_05s0102g00690
N
0.719
Pm003725
Prunus mume
Pm003725
N
0.878
cassava30288.valid.m1
Manihot esculenta
cassava30288.valid.m1
N
0.711
cassava38728.m1
Manihot esculenta
cassava38728.m1
N
0.700
Ciclev10021841m.g
Citrus clementina
Ciclev10021841m.g
N
0.700
evm.TU.supercontig_195.42
Carica papaya
evm.TU.supercontig_195.42
N
0.708
MDP0000618200
Malus domestica
MDP0000618200
N
0.711
orange1.1g025532m.g
Citrus sinensis
orange1.1g025532m.g
N
0.700
SapurV1A.4098s0020
Salix purpurea
SapurV1A.4098s0020
N
0.700