CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.005G129200
(
Gossypium raimondii
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Gorai.005G129200
T181494_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.005G129200.1
FAR1
106
198
EYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIVNGVTQWYISQFSNVHNHELLE
Gorai.005G129200.2
FAR1
71
163
EYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIVNGVTQWYISQFSNVHNHELLE
Gorai.005G129200.3
FAR1
71
163
EYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIVNGVTQWYISQFSNVHNHELLE
Gorai.005G129200.4
FAR1
105
197
EYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIVNGVTQWYISQFSNVHNHELLE
Gorai.005G129200.5
FAR1
71
163
EYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIVNGVTQWYISQFSNVHNHELLE
Links
Other
FAR1
family TFs
Other
Gossypium raimondii
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
THAP9
Oryctolagus cuniculus
ENSOCUG00000000333
N
0.000
ENSP00000305533
Macaca fascicularis
ENSP00000305533
N
0.000
ENSP00000305533-D1
Bos grunniens
ENSP00000305533-D1
N
0.000
THAP9
Vicugna pacos
ENSVPAG00000011351
N
0.000
THAP9
Tursiops truncatus
ENSTTRG00000007672
N
0.000
ENSTSYG00000005287
Tarsius syrichta
ENSTSYG00000005287
N
0.000
THAP9
Tupaia belangeri
ENSTBEG00000017385
N
0.000
ENSSTOG00000012475
Ictidomys tridecemlineatus
ENSSTOG00000012475
N
0.000
THAP9
Sorex araneus
ENSSARG00000003861
N
0.000
THAP9
Pteropus vampyrus
ENSPVAG00000016817
N
0.000
THAP9
Pan troglodytes
ENSPTRG00000016222
N
0.000
ENSPPYG00000014891
Pongo abelii
ENSPPYG00000014891
N
0.000
ENSPANG00000014746
Papio anubis
ENSPANG00000014746
N
0.000
ENSAMEG00000005064
Ailuropoda melanoleuca
ENSAMEG00000005064
N
0.000
ENSOARG00000001821
Ovis aries
ENSOARG00000001821
N
0.000
ENSNLEG00000008931
Nomascus leucogenys
ENSNLEG00000008931
N
0.000
THAP9
Macaca mulatta
ENSMMUG00000008510
N
0.000
ENSMICG00000013028
Microcebus murinus
ENSMICG00000013028
N
0.000
THAP9
Loxodonta africana
ENSLAFG00000016726
N
0.000
THAP9
Gorilla gorilla
ENSGGOG00000011634
N
0.000
THAP9
Homo sapiens
ENSG00000168152
N
0.000
THAP9
Felis catus
ENSFCAG00000022064
N
0.000
ENSECAG00000016694
Equus caballus
ENSECAG00000016694
N
0.000
THAP9
Callithrix jacchus
ENSCJAG00000005095
N
0.000
THAP9
Canis familiaris
ENSCAFG00000009050
N
0.000
THAP9
Bos taurus
ENSBTAG00000022450
N
0.000