CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MDP0000722905
(
Malus domestica
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
MDP0000722905
T181606_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000722905
FAR1
83
171
IFYNSYARRVGFSTRVSVYQRSRRDGSIICRQIVCSREGFRRDGGENRSKRQRTVTRVGCKAQMTVKKQTSGRWAVSKLVKEHNHELVP
Links
Other
FAR1
family TFs
Other
Malus domestica
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0005s27900
Populus trichocarpa
POPTR_0005s27900
N
0.921
PRUPE_ppa026999mg
Prunus persica
PRUPE_ppa026999mg
N
0.966
TCM_034806
Theobroma cacao
TCM_034806
N
0.910
VIT_18s0122g00530
Vitis vinifera
VIT_18s0122g00530
N
0.933
cassava23935.valid.m1
Manihot esculenta
cassava23935.valid.m1
N
0.888
Aquca_007_00963
Aquilegia coerulea
Aquca_007_00963
N
0.767
Aquca_095_00021
Aquilegia coerulea
Aquca_095_00021
N
0.711
Aquca_780_00002
Aquilegia coerulea
Aquca_780_00002
N
0.711
Ciclev10000383m.g
Citrus clementina
Ciclev10000383m.g
N
0.910
Eucgr.F03610
Eucalyptus grandis
Eucgr.F03610
N
0.811
evm.TU.contig_24967.4
Carica papaya
evm.TU.contig_24967.4
N
0.921
gene29166-v1.0-hybrid
Fragaria vesca
gene29166-v1.0-hybrid
N
0.989
orange1.1g004450m.g
Citrus sinensis
orange1.1g004450m.g
N
0.910
SapurV1A.0554s0220
Salix purpurea
SapurV1A.0554s0220
N
0.921