CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Aa01718
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.Aa01718
T181657_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Aa01718.1.p
FAR1
93
181
KLYCDYGHRMGFSIRKGKQTYFTGTKRIRTKDYFCSKEGLKEGEKLTDANFNDPHTRTNCRAMVRFRVNDHGEWKVIRLVSDHNHNLAR
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ecym_2263
Eremothecium cymbalariae
Ecym_2263
I
0.000
PV06_11257
Exophiala oligosperma
PV06_11257
N
0.000
KUCA_T00005495001
Kuraishia capsulata
KUCA_T00005495001
N
0.000
LEMA_P012820.1
Leptosphaeria maculans
LEMA_P012820.1
N
0.000
PEX1_062920
Penicillium expansum
PEX1_062920
N
0.000
PTT_06689
Pyrenophora teres
PTT_06689
N
0.000
PV04_07764
Capronia semiimmersa
PV04_07764
N
0.000
PV05_04423
Exophiala xenobiotica
PV05_04423
N
0.000
PV06_01131
Exophiala oligosperma
PV06_01131
N
0.000
PV06_07837
Exophiala oligosperma
PV06_07837
N
0.000
KUCA_T00003996001
Kuraishia capsulata
KUCA_T00003996001
N
0.000
PV06_11661
Exophiala oligosperma
PV06_11661
N
0.000
PV06_11680
Exophiala oligosperma
PV06_11680
N
0.000
PV08_03348
Exophiala spinifera
PV08_03348
N
0.000
PV11_03278
Exophiala sideris
PV11_03278
N
0.000
SETTUDRAFT_92771
Setosphaeria turcica
SETTUDRAFT_92771
N
0.000
SNOG_11030
Phaeosphaeria nodorum
SNOG_11030
N
0.000
TRIATDRAFT_13310
Trichoderma atroviride
TRIATDRAFT_13310
N
0.000
U727_00432581551
Penicillium solitum
U727_00432581551
N
0.000
estExt_Genewise1Plus.C_70733
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_70733
N
0.000
COCVIDRAFT_20793
Bipolaris victoriae
COCVIDRAFT_20793
N
0.000
A1O1_00464
Capronia coronata
A1O1_00464
N
0.000
A1O1_02535
Capronia coronata
A1O1_02535
N
0.000
CADAFLAG00003334
Aspergillus flavus
CADAFLAG00003334
N
0.000
ANIA_01584
Aspergillus nidulans
CADANIAG00008217
N
0.000
ATEG_06092
Aspergillus terreus
CADATEAG00000839
N
0.000
COCC4DRAFT_130965
Bipolaris maydis
COCC4DRAFT_130965
N
0.000
COCCADRAFT_40088
Bipolaris zeicola
COCCADRAFT_40088
N
0.000
COCMIDRAFT_30122
Bipolaris oryzae
COCMIDRAFT_30122
N
0.000
COCSADRAFT_34052
Bipolaris sorokiniana
COCSADRAFT_34052
N
0.000
KUCA_T00004747001
Kuraishia capsulata
KUCA_T00004747001
N
0.000
EURHEDRAFT_415639
Aspergillus ruber
EURHEDRAFT_415639
N
0.000
FFUJ_11117
Fusarium fujikuroi
FFUJ_11117
N
0.000
HMPREF1120_00198
Exophiala dermatitidis
HMPREF1120_00198
N
0.000
HMPREF1120_04953
Exophiala dermatitidis
HMPREF1120_04953
N
0.000
KUCA_T00000009001
Kuraishia capsulata
KUCA_T00000009001
N
0.000
KUCA_T00003114001
Kuraishia capsulata
KUCA_T00003114001
N
0.000
KUCA_T00003984001
Kuraishia capsulata
KUCA_T00003984001
N
0.000
SNOG_11030
Stagonospora nodorum
SNOG_11030
N
0.000